Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G441200.1 | Wheat | cytosol | 97.8 | 97.33 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 92.44 | 90.67 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 96.1 | 88.54 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 74.88 | 68.99 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 15.12 | 68.89 |
| Zm00001d009747_P001 | Maize | cytosol | 70.98 | 68.79 |
| KXG22681 | Sorghum | cytosol | 71.22 | 68.22 |
| Solyc08g062640.2.1 | Tomato | cytosol | 22.2 | 67.91 |
| Zm00001d039163_P002 | Maize | cytosol | 70.0 | 66.9 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 68.78 | 59.24 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 55.12 | 57.65 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 58.05 | 54.59 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 47.32 | 50.79 |
| TraesCS3D01G249000.1 | Wheat | cytosol | 46.83 | 50.66 |
| CDX96761 | Canola | cytosol | 42.93 | 50.29 |
| CDX83901 | Canola | cytosol | 41.71 | 48.86 |
| Bra016595.1-P | Field mustard | cytosol | 48.54 | 48.54 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 56.59 | 46.77 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 50.98 | 44.0 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 53.9 | 43.5 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 50.98 | 43.18 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 50.98 | 43.18 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 56.34 | 41.92 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 54.63 | 41.79 |
| CDY26234 | Canola | cytosol | 50.49 | 41.73 |
| KRH61549 | Soybean | cytosol | 55.12 | 41.54 |
| AT1G72770.1 | Thale cress | cytosol | 51.71 | 41.49 |
| KRH52222 | Soybean | cytosol | 54.88 | 41.36 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 54.39 | 40.69 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 34.63 | 40.69 |
| Bra025964.1-P | Field mustard | cytosol | 50.24 | 40.55 |
| CDY48313 | Canola | cytosol | 49.51 | 40.52 |
| KRH05300 | Soybean | cytosol | 54.88 | 40.32 |
| KRH15739 | Soybean | cytosol | 54.39 | 40.04 |
| PGSC0003DMT400006608 | Potato | plastid | 53.17 | 40.0 |
| AT1G17550.1 | Thale cress | cytosol | 49.76 | 39.92 |
| TraesCS3D01G238000.1 | Wheat | cytosol, nucleus, plastid | 38.54 | 39.5 |
| TraesCS1D01G419000.1 | Wheat | nucleus | 35.61 | 38.73 |
| TraesCS3D01G355900.1 | Wheat | plastid | 35.12 | 36.27 |
| Solyc08g062650.2.1 | Tomato | extracellular | 39.76 | 34.75 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 34.15 | 34.15 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 30.73 | 34.05 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 28.05 | 33.53 |
| TraesCS3D01G153200.1 | Wheat | nucleus, peroxisome, plastid | 25.37 | 29.63 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 31.95 | 28.85 |
| TraesCS3D01G153000.1 | Wheat | peroxisome | 19.02 | 25.49 |
| TraesCS7D01G390600.1 | Wheat | plasma membrane | 24.88 | 9.56 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009788 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0048364 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF312 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS1D01G449700 | EnsemblPlants:TraesCS1D01G449700.1 | TIGR:cd00143 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:491803945..491806858
Molecular Weight (calculated)
43231.9 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.111
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALGAALPR LALADADAGP DDACGSPCSV ASDCSSVASA DFEGLLSPSG ADAGPPSLLS DDLPAAAAEA AAVPGGACRS VFALDSPPLW GLESVCGRRP
101: EMEDAAAVAP RFYRVPLWMV AGDGAAVDGL DRASFRLPAH FFAVYDGHGG AQVADYCRDK LHAALAEELR AAEDRVVGCD DLSSLDSKKQ WEKALVDCFC
201: RVDAEVEAPD TAGTTAVTAV VCSSHIIVSN CGDSRAVLCR GKAPLPLSLD HKPNREDEYA RIEALGGKVI QWNGYRVLGV LAMSRSIGDR YLKPYIIPVP
301: EVTVVARARE DECLILASDG LWDVLSNEEV CDAARKRILL WHKKNATASS SISRGRSGGD GGSPDPAAQA AAEYLSKLAL QKGSKDNITV LVVDLKAHRK
401: FRSKTDNNNR
101: EMEDAAAVAP RFYRVPLWMV AGDGAAVDGL DRASFRLPAH FFAVYDGHGG AQVADYCRDK LHAALAEELR AAEDRVVGCD DLSSLDSKKQ WEKALVDCFC
201: RVDAEVEAPD TAGTTAVTAV VCSSHIIVSN CGDSRAVLCR GKAPLPLSLD HKPNREDEYA RIEALGGKVI QWNGYRVLGV LAMSRSIGDR YLKPYIIPVP
301: EVTVVARARE DECLILASDG LWDVLSNEEV CDAARKRILL WHKKNATASS SISRGRSGGD GGSPDPAAQA AAEYLSKLAL QKGSKDNITV LVVDLKAHRK
401: FRSKTDNNNR
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.