Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G126800.1 | Wheat | cytosol | 99.02 | 99.02 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 98.54 | 98.54 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 38.05 | 90.7 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 89.76 | 88.04 |
| Zm00001d037719_P001 | Maize | cytosol | 79.02 | 82.23 |
| EES17886 | Sorghum | cytosol | 79.02 | 82.23 |
| Zm00001d010445_P001 | Maize | cytosol | 78.05 | 81.22 |
| KRH47929 | Soybean | cytosol | 69.76 | 77.3 |
| PGSC0003DMT400012888 | Potato | cytosol | 65.85 | 76.27 |
| Solyc08g082180.2.1 | Tomato | cytosol | 69.76 | 75.66 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 67.8 | 75.14 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 67.8 | 75.14 |
| PGSC0003DMT400031686 | Potato | cytosol | 69.27 | 75.13 |
| Zm00001d002533_P001 | Maize | cytosol | 45.85 | 74.6 |
| Solyc12g055990.1.1 | Tomato | cytosol | 65.85 | 74.59 |
| Solyc03g007310.2.1 | Tomato | cytosol | 66.83 | 74.05 |
| GSMUA_Achr4P08490_001 | Banana | cytosol | 71.22 | 73.37 |
| PGSC0003DMT400023511 | Potato | cytosol | 65.85 | 72.97 |
| GSMUA_Achr10P... | Banana | cytosol | 65.85 | 72.58 |
| KRH18155 | Soybean | cytosol | 67.32 | 72.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.88 | 71.51 |
| GSMUA_Achr10P... | Banana | cytosol | 64.88 | 71.51 |
| KRH65845 | Soybean | cytosol | 67.32 | 71.5 |
| AT1G01360.1 | Thale cress | cytosol | 64.88 | 71.12 |
| CDY15183 | Canola | cytosol | 64.39 | 70.59 |
| Bra033267.1-P | Field mustard | cytosol | 63.9 | 70.43 |
| CDY64350 | Canola | cytosol | 62.44 | 69.95 |
| PGSC0003DMT400000606 | Potato | cytosol | 63.41 | 69.89 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 63.41 | 69.89 |
| CDX90028 | Canola | cytosol | 63.9 | 69.68 |
| CDY04688 | Canola | cytosol | 62.93 | 69.35 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 64.88 | 69.27 |
| Bra003077.1-P | Field mustard | cytosol | 61.95 | 69.02 |
| CDY49462 | Canola | cytosol | 61.95 | 69.02 |
| Solyc01g095700.2.1 | Tomato | cytosol | 62.44 | 68.82 |
| CDX96197 | Canola | cytosol | 62.93 | 68.62 |
| Bra029093.1-P | Field mustard | cytosol | 61.46 | 68.48 |
| CDY38728 | Canola | cytosol | 61.46 | 68.48 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 97.07 | 68.38 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 62.44 | 68.09 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 68.29 | 67.96 |
| CDY61488 | Canola | cytosol | 60.98 | 67.93 |
| Bra022634.1-P | Field mustard | cytosol | 61.95 | 67.55 |
| KRH53449 | Soybean | cytosol | 62.93 | 67.54 |
| CDY27022 | Canola | cytosol | 61.46 | 67.02 |
| CDY25052 | Canola | cytosol | 60.98 | 66.84 |
| Bra000938.1-P | Field mustard | cytosol | 62.93 | 66.84 |
| CDX91871 | Canola | cytosol | 62.93 | 66.84 |
| CDX74368 | Canola | cytosol | 62.93 | 66.84 |
| GSMUA_Achr4P15670_001 | Banana | cytosol | 60.49 | 66.31 |
| Bra003463.1-P | Field mustard | cytosol | 60.0 | 65.78 |
| CDY53905 | Canola | cytosol | 60.0 | 65.78 |
| CDY07165 | Canola | cytosol | 19.02 | 65.0 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 65.37 | 64.11 |
| AT4G27920.1 | Thale cress | cytosol | 56.1 | 62.84 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 58.54 | 62.83 |
| Bra026299.1-P | Field mustard | cytosol | 56.1 | 62.5 |
| CDX89219 | Canola | cytosol | 56.1 | 62.16 |
| CDY70517 | Canola | cytosol | 55.61 | 61.62 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 67.8 | 60.96 |
| AT4G01026.1 | Thale cress | cytosol | 61.46 | 59.72 |
| KRH65286 | Soybean | cytosol | 23.9 | 53.85 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 51.22 | 53.85 |
| KRH16733 | Soybean | cytosol | 27.32 | 53.33 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 39.02 | 50.31 |
| TraesCS3B01G380300.1 | Wheat | mitochondrion, plastid | 43.41 | 43.0 |
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 40.49 | 42.78 |
| TraesCS7B01G269600.1 | Wheat | cytosol | 40.98 | 42.64 |
| TraesCS2B01G105300.1 | Wheat | plastid | 42.44 | 40.09 |
| TraesCS4B01G189800.1 | Wheat | cytosol | 42.44 | 38.84 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 37.07 | 35.68 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0090351 | GO:GO:1905183 | InterPro:IPR023393 | PFAM:PF10604 | PANTHER:PTHR31213 |
| PANTHER:PTHR31213:SF4 | InterPro:Polyketide_cyclase/dehydratase | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | EnsemblPlantsGene:TraesCS1B01G145800 | EnsemblPlants:TraesCS1B01G145800.1 |
| TIGR:cd07821 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:200298274..200300000
Molecular Weight (calculated)
22219.3 Da
IEP (calculated)
6.153
GRAVY (calculated)
-0.220
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGLLGGGAR AWRLSDEAAN GAVGGGAATE ADYMRRLHGH APGENQCTSA LVKHIKAPVH LVWSLVRSFD QPQRYKPFVS RCVVRGGDLE IGSVREVNVK
101: TGLPATTSTE RLEQLDDDEH ILSVKFVGGD HRLRNYSSII TVHPQSIDGR PGTLVIESFV VDVPDGNTKD ETCYFVEAVI KCNLTSLAEV SERLAVQSPT
201: SPLEQ
101: TGLPATTSTE RLEQLDDDEH ILSVKFVGGD HRLRNYSSII TVHPQSIDGR PGTLVIESFV VDVPDGNTKD ETCYFVEAVI KCNLTSLAEV SERLAVQSPT
201: SPLEQ
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.