Factsheet for GSMUA_Achr2P15420_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P26270_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01360.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT1G01360.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT1G01360.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT1G01360.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407143
AT1G01360.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407143
AT1G01360.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407143
AT4G01026.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT4G01026.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT4G01026.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT4G27920.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT4G27920.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT4G27920.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	71.49	87.63
GSMUA_Achr10P...	Banana	cytosol	67.98	83.33
GSMUA_Achr2P19970_001	Banana	cytosol	64.04	78.49
GSMUA_Achr10P...	Banana	cytosol	63.6	77.96
VIT_02s0025g01340.t01	Wine grape	cytosol	63.16	77.84
GSMUA_Achr3P03480_001	Banana	cytosol	69.74	77.18
Solyc03g007310.2.1	Tomato	cytosol	61.84	76.22
VIT_16s0050g02620.t01	Wine grape	cytosol	61.4	75.68
PGSC0003DMT400023511	Potato	cytosol	60.96	75.14
KRH47929	Soybean	cytosol	59.65	73.51
PGSC0003DMT400012888	Potato	cytosol	56.58	72.88
GSMUA_Achr8P19910_001	Banana	mitochondrion	66.67	72.73
KRH18155	Soybean	cytosol	60.53	72.25
KRH65845	Soybean	cytosol	60.96	72.02
PGSC0003DMT400031686	Potato	cytosol	59.65	71.96
Solyc08g082180.2.1	Tomato	cytosol	59.65	71.96
KRH53449	Soybean	cytosol	60.09	71.73
Solyc12g055990.1.1	Tomato	cytosol	56.58	71.27
Bra003077.1-P	Field mustard	cytosol	57.46	71.2
CDY49462	Canola	cytosol	57.46	71.2
GSMUA_Achr4P08490_001	Banana	cytosol	61.84	70.85
CDY15183	Canola	cytosol	57.89	70.59
Bra033267.1-P	Field mustard	cytosol	57.46	70.43
CDY61488	Canola	cytosol	56.58	70.11
AT1G01360.1	Thale cress	cytosol	57.46	70.05
CDY04688	Canola	cytosol	57.02	69.89
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	26.32	69.77
CDX90028	Canola	cytosol	57.46	69.68
CDX96197	Canola	cytosol	57.46	69.68
CDY64350	Canola	cytosol	55.7	69.4
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	57.02	69.15
Bra022634.1-P	Field mustard	cytosol	56.58	68.62
CDY25052	Canola	cytosol	56.14	68.45
CDY27022	Canola	cytosol	56.14	68.09
CDY38728	Canola	cytosol	54.82	67.93
CDX74368	Canola	cytosol	57.46	67.88
TraesCS1A01G126800.1	Wheat	cytosol	60.96	67.8
TraesCS1D01G126900.1	Wheat	cytosol	60.96	67.8
TraesCS1B01G145800.1	Wheat	cytosol	60.96	67.8
Bra029093.1-P	Field mustard	cytosol	54.39	67.39
Bra000938.1-P	Field mustard	cytosol	57.02	67.36
Os02t0255500-01	Rice	cytosol	60.09	67.16
Os05t0213500-01	Rice	cytosol, nucleus	61.4	66.99
Bra003463.1-P	Field mustard	cytosol	54.82	66.84
CDY53905	Canola	cytosol	54.82	66.84
PGSC0003DMT400000606	Potato	cytosol	54.39	66.67
Solyc01g095700.2.1	Tomato	cytosol	53.95	66.13
CDX91871	Canola	cytosol	55.7	65.8
Zm00001d010445_P001	Maize	cytosol	56.58	65.48
Zm00001d037719_P001	Maize	cytosol	56.58	65.48
VIT_15s0046g01050.t01	Wine grape	cytosol	54.82	65.1
EES17886	Sorghum	cytosol	56.14	64.97
EES04864	Sorghum	cytosol	60.09	64.93
Zm00001d016105_P001	Maize	cytosol	60.09	64.62
GSMUA_Achr4P15670_001	Banana	cytosol	52.63	64.17
AT4G27920.1	Thale cress	cytosol	51.32	63.93
CDY70517	Canola	cytosol	51.75	63.78
Bra026299.1-P	Field mustard	cytosol	51.32	63.59
CDX89219	Canola	cytosol	51.32	63.24
CDY07165	Canola	cytosol	16.23	61.67
Zm00001d053396_P001	Maize	cytosol	58.33	61.29
KRH06494	Soybean	cytosol, extracellular, vacuole	50.44	60.21
Zm00001d002533_P001	Maize	cytosol	32.89	59.52
AT4G01026.1	Thale cress	cytosol	54.82	59.24
KRH65286	Soybean	cytosol	22.37	56.04
Os02t0255300-00	Rice	cytosol, plastid	43.86	55.56
KRH16733	Soybean	cytosol	24.56	53.33
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	45.61	53.33
TraesCS7D01G328000.1	Wheat	cytosol	45.18	52.28
Os06t0527800-01	Rice	cytosol	46.93	51.94
Os06t0528300-00	Rice	cytosol	46.49	51.46
HORVU7Hr1G079270.1	Barley	cytosol	43.86	50.76
TraesCS7A01G350800.1	Wheat	cytosol	43.42	50.25
Os06t0526400-00	Rice	cytosol	42.98	50.0
GSMUA_Achr4P10630_001	Banana	mitochondrion	34.65	49.07
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	60.96	47.77
GSMUA_Achr7P09320_001	Banana	cytosol	35.09	43.01
GSMUA_Achr6P32790_001	Banana	cytosol	39.04	42.18
GSMUA_Achr9P04600_001	Banana	cytosol	25.88	41.26
HORVU3Hr1G054230.1	Barley	mitochondrion	28.51	40.88
GSMUA_Achr10P...	Banana	cytosol	35.09	40.61
GSMUA_Achr6P00980_001	Banana	cytosol	34.21	40.0
GSMUA_Achr4P19170_001	Banana	cytosol	33.77	39.69
GSMUA_Achr8P14780_001	Banana	cytosol	35.53	39.32
GSMUA_AchrUn_...	Banana	plastid	26.75	38.61
GSMUA_Achr9P17980_001	Banana	cytosol	24.56	37.58
GSMUA_Achr11P...	Banana	cytosol, plastid	25.88	37.34
GSMUA_Achr5P29490_001	Banana	plastid	25.88	36.42
GSMUA_Achr4P15170_001	Banana	cytosol	39.04	35.6
GSMUA_Achr8P21220_001	Banana	cytosol	25.44	34.12
GSMUA_Achr10P...	Banana	cytosol, plastid	28.51	32.83
Os06t0526466-00	Rice	cytosol, mitochondrion	18.86	31.16

Protein Annotations

EnsemblPlants:GSMUA_Achr2P15420_001	EnsemblPlants:GSMUA_Achr2T15420_001	EnsemblPlantsGene:GSMUA_Achr2G15420_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF4	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000294C338	UniProt:M0S883	MapMan:11.1.2.1.1.1	:	:	:

Description

Abscisic acid receptor PYL8 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15420_001]

Coordinates

chr2:-:16757506..16759715

Molecular Weight (calculated)

24741.4 Da

IEP (calculated)

6.224

GRAVY (calculated)

-0.254

Length

228 amino acids

Sequence
(BLAST)

001: MVGISGAGVA AGRGAGSWRL ADEMHPPGGG CRPVAAEYMR RFHCHEPEEN QCSSAILKHI KAPVHLVWSL VRRFDEPQKY KPFVSRCIAQ GDLGIGSLRE
101: VNVKSGLPAT TSTERLEHLD DSEHILSFKI VGGDHRLKNY SSIVSAHPEI IDGRPGTLVI ESFVVDVPDG NTKDETCYFV EVLIKCNLKS LAEISEHLPL
201: QDHTEPICLD RGGDTGGVTS DVSGPSVH

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.