Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0583100-01 | |
| Os05t0537400-00 | |
| Os05t0592800-02 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0528300-00 | Rice | cytosol | 92.23 | 92.23 |
| Os06t0526400-00 | Rice | cytosol | 71.84 | 75.51 |
| Os02t0255500-01 | Rice | cytosol | 66.99 | 67.65 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 63.59 | 67.18 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 61.16 | 63.96 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 60.68 | 63.45 |
| KRH18155 | Soybean | cytosol | 57.28 | 61.78 |
| PGSC0003DMT400012888 | Potato | cytosol | 52.91 | 61.58 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 58.74 | 61.42 |
| Solyc12g055990.1.1 | Tomato | cytosol | 53.88 | 61.33 |
| KRH47929 | Soybean | cytosol | 54.85 | 61.08 |
| KRH65845 | Soybean | cytosol | 56.8 | 60.62 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 54.37 | 60.54 |
| GSMUA_Achr10P... | Banana | cytosol | 54.37 | 60.22 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 53.88 | 60.0 |
| GSMUA_Achr10P... | Banana | cytosol | 53.88 | 59.68 |
| AT1G01360.1 | Thale cress | cytosol | 53.88 | 59.36 |
| PGSC0003DMT400031686 | Potato | cytosol | 54.37 | 59.26 |
| Solyc08g082180.2.1 | Tomato | cytosol | 54.37 | 59.26 |
| Solyc03g007310.2.1 | Tomato | cytosol | 52.91 | 58.92 |
| GSMUA_Achr4P08490_001 | Banana | cytosol | 56.8 | 58.79 |
| CDY49462 | Canola | cytosol | 51.94 | 58.15 |
| PGSC0003DMT400023511 | Potato | cytosol | 51.94 | 57.84 |
| CDY25052 | Canola | cytosol | 52.43 | 57.75 |
| Bra003077.1-P | Field mustard | cytosol | 51.46 | 57.61 |
| Bra003463.1-P | Field mustard | cytosol | 51.94 | 57.22 |
| CDY53905 | Canola | cytosol | 51.94 | 57.22 |
| CDY61488 | Canola | cytosol | 50.97 | 57.07 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 51.46 | 56.99 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.46 | 56.99 |
| Bra033267.1-P | Field mustard | cytosol | 51.46 | 56.99 |
| CDX96197 | Canola | cytosol | 51.94 | 56.91 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 51.94 | 56.91 |
| CDY64350 | Canola | cytosol | 50.49 | 56.83 |
| KRH53449 | Soybean | cytosol | 52.43 | 56.54 |
| CDY38728 | Canola | cytosol | 50.49 | 56.52 |
| CDX90028 | Canola | cytosol | 51.46 | 56.38 |
| Bra022634.1-P | Field mustard | cytosol | 50.97 | 55.85 |
| AT4G27920.1 | Thale cress | cytosol | 49.51 | 55.74 |
| CDY15183 | Canola | cytosol | 50.49 | 55.62 |
| Bra029093.1-P | Field mustard | cytosol | 49.51 | 55.43 |
| CDY04688 | Canola | cytosol | 50.0 | 55.38 |
| CDY27022 | Canola | cytosol | 50.49 | 55.32 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 36.89 | 55.07 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 55.34 | 54.55 |
| CDX74368 | Canola | cytosol | 50.97 | 54.4 |
| Solyc01g095700.2.1 | Tomato | cytosol | 49.03 | 54.3 |
| PGSC0003DMT400000606 | Potato | cytosol | 49.03 | 54.3 |
| KRH16733 | Soybean | cytosol | 27.67 | 54.29 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 54.85 | 54.07 |
| Bra000938.1-P | Field mustard | cytosol | 50.49 | 53.89 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 53.4 | 53.4 |
| CDX91871 | Canola | cytosol | 50.0 | 53.37 |
| Bra026299.1-P | Field mustard | cytosol | 47.57 | 53.26 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 49.51 | 53.12 |
| CDX89219 | Canola | cytosol | 47.57 | 52.97 |
| CDY70517 | Canola | cytosol | 47.57 | 52.97 |
| KRH65286 | Soybean | cytosol | 23.3 | 52.75 |
| Os02t0255300-00 | Rice | cytosol, plastid | 44.17 | 50.56 |
| GSMUA_Achr4P15670_001 | Banana | cytosol | 45.15 | 49.73 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 45.63 | 49.21 |
| AT4G01026.1 | Thale cress | cytosol | 50.0 | 48.82 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 51.94 | 46.93 |
| CDY07165 | Canola | cytosol | 13.59 | 46.67 |
| Os10t0573400-01 | Rice | plasma membrane | 39.81 | 38.68 |
| Os06t0562200-01 | Rice | cytosol | 35.92 | 35.75 |
| Os05t0473000-01 | Rice | cytosol | 36.89 | 35.02 |
| Os02t0226801-00 | Rice | cytosol | 34.47 | 33.81 |
| Os03t0297600-01 | Rice | cytosol | 36.89 | 33.19 |
| Os01t0827800-00 | Rice | plastid | 36.89 | 29.69 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | EntrezGene:4341193 | EntrezGene:4341194 | EMBL:AK108261 | ProteinID:BAD46129.1 |
| ProteinID:BAD54200.1 | ProteinID:BAD54206.1 | ProteinID:BAF19685.1 | ProteinID:BAF19686.1 | ProteinID:BAS98048.1 | ProteinID:BAS98049.1 |
| ncoils:Coil | ProteinID:EAZ37204.1 | ProteinID:EAZ37208.1 | InterPro:IPR023393 | EnsemblPlantsGene:Os06g0527800 | EnsemblPlants:Os06t0527800-01 |
| PFAM:PF10604 | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF16 | InterPro:Polyketide_cyclase/dehydratase | UniProt:Q652Y8 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI000043A4CE | RefSeq:XP_015641857.1 | RefSeq:XP_015642160.1 | SEG:seg | : |
Description
PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 7, endosperm-specific gene 90, pyrabactin resistance-like 7Similar to Polyketide cyclase. (Os06t0527800-01)
Coordinates
chr6:-:19583323..19585408
Molecular Weight (calculated)
23267.1 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.255
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGAGGAGGA AAGKLPMVSH RRVQCRLADK RCELREEEME YIRQFHRHEP SSNQCTSFVA KHIKAPLQTV WSLVRRFDQP QLFKPFVRKC VMRENIIVTG
101: CVREVNVQSG LPATRSTERL ELLDDNEHIL KVKFIGGDHM LKNYSSILTI HSEVIDGQLG TLVVESFVVD IPDGNTKDDI CYFIENVLRC NLMTLADVSE
201: ERLANP
101: CVREVNVQSG LPATRSTERL ELLDDNEHIL KVKFIGGDHM LKNYSSILTI HSEVIDGQLG TLVVESFVVD IPDGNTKDDI CYFIENVLRC NLMTLADVSE
201: ERLANP
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.