Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G01026.1 | CDX72943 | AT1G72770.1 | 19407142 |
| AT4G01026.1 | CDX96432 | AT1G72770.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 65.0 | 45.35 |
| CDX74368 | Canola | cytosol | 78.33 | 24.35 |
| CDX91871 | Canola | cytosol | 76.67 | 23.83 |
| CDY15183 | Canola | cytosol | 71.67 | 22.99 |
| AT4G01026.1 | Thale cress | cytosol | 80.0 | 22.75 |
| CDY04688 | Canola | cytosol | 70.0 | 22.58 |
| CDX90028 | Canola | cytosol | 70.0 | 22.34 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 66.67 | 21.62 |
| GSMUA_Achr10P... | Banana | cytosol | 66.67 | 21.51 |
| GSMUA_Achr10P... | Banana | cytosol | 66.67 | 21.51 |
| CDY49462 | Canola | cytosol | 65.0 | 21.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.0 | 20.97 |
| PGSC0003DMT400012888 | Potato | cytosol | 61.67 | 20.9 |
| CDY64350 | Canola | cytosol | 63.33 | 20.77 |
| CDY61488 | Canola | cytosol | 63.33 | 20.65 |
| CDY38728 | Canola | cytosol | 63.33 | 20.65 |
| Solyc08g082180.2.1 | Tomato | cytosol | 65.0 | 20.63 |
| PGSC0003DMT400031686 | Potato | cytosol | 65.0 | 20.63 |
| Solyc12g055990.1.1 | Tomato | cytosol | 61.67 | 20.44 |
| CDY25052 | Canola | cytosol | 63.33 | 20.32 |
| CDX96197 | Canola | cytosol | 63.33 | 20.21 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 61.67 | 19.89 |
| CDY27022 | Canola | cytosol | 61.67 | 19.68 |
| EES17886 | Sorghum | cytosol | 63.33 | 19.29 |
| Zm00001d037719_P001 | Maize | cytosol | 63.33 | 19.29 |
| Zm00001d010445_P001 | Maize | cytosol | 63.33 | 19.29 |
| CDY53905 | Canola | cytosol | 60.0 | 19.25 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 66.67 | 19.14 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 65.0 | 19.02 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 65.0 | 19.02 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 65.0 | 19.02 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 65.0 | 18.93 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 65.0 | 18.66 |
| Os02t0255500-01 | Rice | cytosol | 61.67 | 18.14 |
| CDY70517 | Canola | cytosol | 55.0 | 17.84 |
| CDX89219 | Canola | cytosol | 55.0 | 17.84 |
| Os02t0255300-00 | Rice | cytosol, plastid | 53.33 | 17.78 |
| EES04864 | Sorghum | cytosol | 60.0 | 17.06 |
| Zm00001d016105_P001 | Maize | cytosol | 60.0 | 16.98 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 61.67 | 16.23 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 36.67 | 15.94 |
| Zm00001d053396_P001 | Maize | cytosol | 56.67 | 15.67 |
| Os06t0526400-00 | Rice | cytosol | 48.33 | 14.8 |
| Os06t0527800-01 | Rice | cytosol | 46.67 | 13.59 |
| CDX76554 | Canola | cytosol | 35.0 | 13.55 |
| CDY08877 | Canola | cytosol | 35.0 | 13.55 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 65.0 | 13.4 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 43.33 | 13.2 |
| Os06t0528300-00 | Rice | cytosol | 45.0 | 13.11 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 41.67 | 12.82 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 41.67 | 12.69 |
| CDX91449 | Canola | plastid | 43.33 | 12.56 |
| CDY54453 | Canola | plastid | 43.33 | 12.5 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 40.0 | 12.18 |
| CDY18391 | Canola | plastid | 40.0 | 11.76 |
| CDY54415 | Canola | cytosol | 40.0 | 11.76 |
| CDY68675 | Canola | cytosol | 31.67 | 11.73 |
| CDY58053 | Canola | cytosol | 31.67 | 11.73 |
| CDY14471 | Canola | plastid | 40.0 | 11.59 |
| CDY07739 | Canola | plastid | 40.0 | 11.59 |
| CDX78879 | Canola | cytosol | 31.67 | 11.45 |
| CDX99450 | Canola | cytosol | 31.67 | 11.45 |
| CDY58019 | Canola | cytosol | 31.67 | 11.45 |
| CDY01498 | Canola | cytosol | 35.0 | 10.99 |
| CDX90440 | Canola | cytosol | 35.0 | 10.99 |
| CDY03194 | Canola | nucleus | 35.0 | 10.99 |
| CDY69797 | Canola | cytosol | 35.0 | 10.99 |
| CDY68316 | Canola | nucleus | 35.0 | 10.99 |
| CDY70860 | Canola | cytosol | 33.33 | 10.75 |
| CDY04951 | Canola | cytosol | 35.0 | 10.66 |
| CDY58505 | Canola | nucleus | 36.67 | 10.48 |
| CDX93191 | Canola | cytosol | 35.0 | 10.34 |
| CDX98844 | Canola | cytosol | 35.0 | 10.29 |
| CDY52923 | Canola | cytosol | 35.0 | 10.24 |
| CDX77691 | Canola | nucleus | 36.67 | 10.23 |
| CDY11503 | Canola | cytosol | 31.67 | 10.11 |
| CDX80959 | Canola | cytosol | 33.33 | 9.85 |
| CDX70150 | Canola | cytosol | 33.33 | 9.8 |
| CDX76731 | Canola | cytosol | 30.0 | 9.57 |
| CDY07608 | Canola | cytosol, mitochondrion | 33.33 | 9.43 |
| CDY24911 | Canola | cytosol, mitochondrion | 33.33 | 9.39 |
| CDY72318 | Canola | cytosol | 31.67 | 9.36 |
| CDY22516 | Canola | plastid | 31.67 | 9.27 |
| CDY48030 | Canola | plastid | 31.67 | 9.27 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.67 | 8.96 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 31.67 | 8.96 |
| CDX82120 | Canola | plastid | 30.0 | 8.78 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 13.33 | 5.03 |
| Zm00001d002533_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY07165 | EnsemblPlantsGene:GSBRNA2T00123523001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31213 |
| PANTHER:PTHR31213:SF4 | ProteinID:CDY07165 | ProteinID:CDY07165.1 | UniParc:UPI0004EADCC8 | MapMan:35.1 | : |
Description
BnaCnng01800D
Coordinates
chrLK031975:+:642152..642334
Molecular Weight (calculated)
6568.9 Da
IEP (calculated)
4.194
GRAVY (calculated)
0.278
Length
60 amino acids
Sequence
(BLAST)
(BLAST)
1: MINGSSGTMV IESFVVDVPQ GNTRDDTCYF VESLIKCNMK SLACVSERLA AQEIYSLTCV
001: MEMIGGDDTD TEMYGALVTA QSLRLRHLHH CRENQCTSVL VKYIQAPVHL VWSLVRRFDQ PQKYKPFISR CTVNGDPEIG CLREVNVKSG LPATTSTERL
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L
Arabidopsis Description
PYL7RCAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTD1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.