Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 97.47 | 95.66 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 97.47 | 95.66 |
| AT1G72770.1 | Thale cress | cytosol | 86.74 | 80.63 |
| CDX96761 | Canola | cytosol | 56.84 | 77.14 |
| CDX83901 | Canola | cytosol | 55.37 | 75.14 |
| CDY26234 | Canola | cytosol | 74.11 | 70.97 |
| CDY48313 | Canola | cytosol | 73.89 | 70.06 |
| CDY50002 | Canola | cytosol | 21.89 | 60.82 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 46.95 | 56.89 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 34.74 | 56.31 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 63.58 | 55.11 |
| Os01t0583100-01 | Rice | cytosol | 45.47 | 54.55 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 5.68 | 52.94 |
| PGSC0003DMT400006608 | Potato | plastid | 60.63 | 52.84 |
| CDY42756 | Canola | cytosol | 44.63 | 51.33 |
| Zm00001d009747_P001 | Maize | cytosol | 45.47 | 51.06 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 44.0 | 50.98 |
| CDY50003 | Canola | nucleus | 43.79 | 50.73 |
| TraesCS1A01G441200.1 | Wheat | cytosol | 44.0 | 50.73 |
| CDX92752 | Canola | cytosol | 43.58 | 50.49 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 46.53 | 50.46 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 35.79 | 50.45 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 44.63 | 50.12 |
| CDX94382 | Canola | cytosol | 44.21 | 50.0 |
| CDY38260 | Canola | cytosol | 44.42 | 50.0 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 45.68 | 49.77 |
| KXG22422 | Sorghum | cytosol, nucleus, plastid | 39.79 | 49.74 |
| Zm00001d039163_P002 | Maize | cytosol | 44.84 | 49.65 |
| CDX89368 | Canola | cytosol | 44.42 | 49.53 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 38.53 | 49.46 |
| KXG22681 | Sorghum | cytosol | 44.42 | 49.3 |
| CDY14318 | Canola | nucleus | 43.79 | 49.29 |
| TraesCS1A01G358600.1 | Wheat | cytosol | 39.37 | 49.21 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 43.16 | 49.04 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 15.37 | 48.99 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 39.16 | 48.82 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.84 | 48.74 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 49.05 | 48.64 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 48.84 | 48.64 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 39.16 | 48.44 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.84 | 48.43 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 38.95 | 48.43 |
| EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 49.05 | 48.34 |
| OQU87413 | Sorghum | cytosol | 38.74 | 48.04 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 48.84 | 47.93 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 44.84 | 47.87 |
| TraesCS3D01G249000.1 | Wheat | cytosol | 38.11 | 47.76 |
| TraesCS3A01G249000.1 | Wheat | cytosol | 38.32 | 47.15 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 43.58 | 46.52 |
| CDY18067 | Canola | cytosol | 5.68 | 45.76 |
| Zm00001d011131_P001 | Maize | cytosol | 26.11 | 43.97 |
| TraesCS3B01G277900.1 | Wheat | cytosol | 38.32 | 43.65 |
| Os05t0537400-00 | Rice | cytosol | 27.16 | 43.58 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 45.26 | 43.35 |
| Solyc08g062650.2.1 | Tomato | extracellular | 38.32 | 38.81 |
| CDY67227 | Canola | cytosol | 30.11 | 38.54 |
| CDY40181 | Canola | cytosol | 29.68 | 38.52 |
| CDY67257 | Canola | nucleus | 29.89 | 38.27 |
| CDY45436 | Canola | cytosol | 29.47 | 38.25 |
| TraesCS7A01G047900.1 | Wheat | cytosol, mitochondrion, peroxisome | 8.63 | 36.94 |
| CDY01017 | Canola | nucleus | 30.32 | 36.64 |
| CDY08530 | Canola | nucleus | 30.32 | 36.64 |
| CDX80307 | Canola | nucleus, plastid | 29.26 | 35.1 |
| CDY33008 | Canola | nucleus, plastid | 29.05 | 34.94 |
| CDY06705 | Canola | nucleus | 28.42 | 34.62 |
| CDY38877 | Canola | cytosol | 29.05 | 33.99 |
| CDY32620 | Canola | cytosol | 27.16 | 32.99 |
| CDY10275 | Canola | nucleus | 29.26 | 32.33 |
| CDY06259 | Canola | nucleus | 28.21 | 30.73 |
| CDY36606 | Canola | nucleus | 14.11 | 26.8 |
| CDY53715 | Canola | plasma membrane, vacuole | 18.95 | 8.7 |
| CDX93912 | Canola | plasma membrane, vacuole | 18.95 | 8.69 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078CD84 |
| EnsemblPlants:CDX72943 | ProteinID:CDX72943 | ProteinID:CDX72943.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:GSBRNA2T00103369001 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF374 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EE72B8 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g33910D
Coordinates
chrLK031797:+:1259543..1262183
Molecular Weight (calculated)
51799.6 Da
IEP (calculated)
4.613
GRAVY (calculated)
-0.200
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMTPAVAV TLSLANSICD SSPVDITQLK NVTDAADLLP DSTMEEQQPK KGSCDGSVVD EDEVEDTSAV ISEGLLVVDA GSELSLSMEI ENGRVLAKAI
101: ILGESSIEQV PTAQVLIQDT EIEDGSGVTA SEVVIRLPEE NNNNHVARGR SVYELDCIPL WGTVSIQGNR SEMEDAVAVL PHFLKLPIKM LMGDHEGMSP
201: SLTHLTGHFF GVYDGHGGYQ VADYCRDRLH YALAEEIERI KDELCKRNTG EGRQVQWEKV FTSCFLNVDG EIEGRIGRAA AAAVASETVG STAVVALVCS
301: SHLVVSNCGD SRAVLYRGKE AMPLSVDHKP DREDEYARIE NAGGKVIQWQ GARVFGVLAM SRSLGDRYLK PYVIPEPEVT FMPRSREDDC LIIASDGLWD
401: VMSNQEVCEV ARKRILMWHK KHGAPPLAER GKGTDPACQA AAEYLSVLAL QKGSKDNISI IVVDLKAQRK FKTRA
101: ILGESSIEQV PTAQVLIQDT EIEDGSGVTA SEVVIRLPEE NNNNHVARGR SVYELDCIPL WGTVSIQGNR SEMEDAVAVL PHFLKLPIKM LMGDHEGMSP
201: SLTHLTGHFF GVYDGHGGYQ VADYCRDRLH YALAEEIERI KDELCKRNTG EGRQVQWEKV FTSCFLNVDG EIEGRIGRAA AAAVASETVG STAVVALVCS
301: SHLVVSNCGD SRAVLYRGKE AMPLSVDHKP DREDEYARIE NAGGKVIQWQ GARVFGVLAM SRSLGDRYLK PYVIPEPEVT FMPRSREDDC LIIASDGLWD
401: VMSNQEVCEV ARKRILMWHK KHGAPPLAER GKGTDPACQA AAEYLSVLAL QKGSKDNISI IVVDLKAQRK FKTRA
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.