Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013945.1-P | Field mustard | cytosol | 99.3 | 99.53 |
| CDX94382 | Canola | cytosol | 97.65 | 99.05 |
| CDY42756 | Canola | cytosol | 88.97 | 91.77 |
| CDX92752 | Canola | cytosol | 87.09 | 90.49 |
| CDY14318 | Canola | nucleus | 87.56 | 88.39 |
| CDY50003 | Canola | nucleus | 84.27 | 87.56 |
| CDY50002 | Canola | cytosol | 34.27 | 85.38 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 86.85 | 85.25 |
| CDY38260 | Canola | cytosol | 73.71 | 74.41 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 72.54 | 73.05 |
| CDX96761 | Canola | cytosol | 41.55 | 50.57 |
| CDX83901 | Canola | cytosol | 40.61 | 49.43 |
| CDY18067 | Canola | cytosol | 6.81 | 49.15 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 49.53 | 44.42 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 49.3 | 43.39 |
| CDY67227 | Canola | cytosol | 36.62 | 42.05 |
| CDY67257 | Canola | nucleus | 36.38 | 41.78 |
| CDY26234 | Canola | cytosol | 48.36 | 41.53 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 51.64 | 41.04 |
| KRH37441 | Soybean | cytosol | 49.77 | 40.61 |
| KRH12454 | Soybean | cytosol | 50.23 | 40.61 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 51.17 | 40.52 |
| CDY48313 | Canola | cytosol | 47.65 | 40.52 |
| CDY40181 | Canola | cytosol | 34.74 | 40.44 |
| CDY45436 | Canola | cytosol | 34.74 | 40.44 |
| PGSC0003DMT400046382 | Potato | cytosol | 49.3 | 38.6 |
| CDY08530 | Canola | nucleus | 35.45 | 38.42 |
| CDY01017 | Canola | nucleus | 35.45 | 38.42 |
| CDY06705 | Canola | nucleus | 34.51 | 37.69 |
| Solyc07g040990.2.1 | Tomato | cytosol | 47.18 | 37.5 |
| CDX80307 | Canola | nucleus, plastid | 34.27 | 36.87 |
| CDY33008 | Canola | nucleus, plastid | 34.04 | 36.71 |
| CDY38877 | Canola | cytosol | 33.33 | 34.98 |
| CDY10275 | Canola | nucleus | 35.21 | 34.88 |
| CDY32620 | Canola | cytosol | 31.46 | 34.27 |
| CDY06259 | Canola | nucleus | 34.74 | 33.95 |
| CDY36606 | Canola | nucleus | 17.14 | 29.2 |
| CDY53715 | Canola | plasma membrane, vacuole | 23.24 | 9.57 |
| CDX93912 | Canola | plasma membrane, vacuole | 23.24 | 9.56 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078DQ69 |
| EnsemblPlants:CDX89368 | ProteinID:CDX89368 | ProteinID:CDX89368.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:GSBRNA2T00149597001 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EECFBC |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g15250D
Coordinates
chrLK031858:+:1150400..1152659
Molecular Weight (calculated)
46706.4 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.421
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVSPAVAM PFMPFPEQQM ELAGIMLGKG YCNGQYSSQD SENGSCSVSG SRKVLTSRIN SPNLNMKKEP SSSSSSSSSS SSSSSEIVVG EEINGSDERS
101: KKMISRTESR SLFEFKSVPL YGVTSICGRR PEMEDAVSTI PRFLQSPTNS MLDGRFNPQT TAHFFGVYDG HGGSQVANYC RERMHLALAE EIAKEKPMLC
201: DGDTWQEKWK KALFNSFLRV DSEVESVAPE TVGSTSVVAV VFPTHIFVAN CGDSRAVLCR GKTALPLSTD HKPDREDEAA RIEAAGGKVI RWNGARVFGV
301: LAMSRSIGDR YLKPSIIPDP EVTAVRRVKE DDCLILASDG VWDVMTDEEA CEMARKRILL WHKKNAVAGD ASLHTDERRG EGKDPAAMSA AEYLSKLALQ
401: RGSKDNITVV VVDLKPQRKF KSKPLN
101: KKMISRTESR SLFEFKSVPL YGVTSICGRR PEMEDAVSTI PRFLQSPTNS MLDGRFNPQT TAHFFGVYDG HGGSQVANYC RERMHLALAE EIAKEKPMLC
201: DGDTWQEKWK KALFNSFLRV DSEVESVAPE TVGSTSVVAV VFPTHIFVAN CGDSRAVLCR GKTALPLSTD HKPDREDEAA RIEAAGGKVI RWNGARVFGV
301: LAMSRSIGDR YLKPSIIPDP EVTAVRRVKE DDCLILASDG VWDVMTDEEA CEMARKRILL WHKKNAVAGD ASLHTDERRG EGKDPAAMSA AEYLSKLALQ
401: RGSKDNITVV VVDLKPQRKF KSKPLN
001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
Arabidopsis Description
ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.