Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90035 | Canola | cytosol | 86.29 | 95.75 |
| AT1G01480.1 | Thale cress | cytosol | 86.69 | 86.69 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 59.88 | 67.81 |
| KRH65284 | Soybean | cytosol | 16.73 | 67.48 |
| CDY11360 | Canola | cytosol | 64.31 | 67.44 |
| CDY65356 | Canola | cytosol | 63.51 | 66.6 |
| KRH00855 | Soybean | cytosol | 63.71 | 65.83 |
| KRH06585 | Soybean | cytosol | 62.7 | 65.61 |
| KRH48058 | Soybean | cytosol | 62.1 | 64.98 |
| KRH40379 | Soybean | cytosol | 63.31 | 64.74 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 60.69 | 61.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.44 | 60.95 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 58.67 | 60.5 |
| CDY13251 | Canola | cytosol | 59.68 | 60.29 |
| CDX86796 | Canola | cytosol | 59.27 | 60.25 |
| EES12700 | Sorghum | cytosol | 58.06 | 58.66 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 57.46 | 58.64 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 57.46 | 58.64 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 57.26 | 58.44 |
| Os04t0578000-01 | Rice | cytosol | 56.85 | 58.39 |
| Zm00001d002592_P002 | Maize | cytosol | 56.85 | 58.14 |
| CDY66472 | Canola | cytosol | 46.37 | 57.07 |
| CDY72652 | Canola | cytosol | 22.38 | 55.22 |
| CDX75675 | Canola | cytosol | 50.0 | 54.99 |
| Zm00001d026060_P003 | Maize | cytosol | 56.05 | 54.51 |
| CDY71142 | Canola | cytosol | 49.19 | 54.46 |
| CDX94359 | Canola | cytosol | 49.19 | 54.46 |
| CDX89355 | Canola | cytosol | 48.99 | 54.24 |
| CDY42751 | Canola | cytosol | 49.19 | 54.1 |
| CDY69462 | Canola | cytosol | 51.01 | 53.94 |
| CDX69326 | Canola | cytosol | 50.2 | 53.09 |
| CDY08163 | Canola | cytosol | 50.2 | 52.98 |
| CDY23035 | Canola | cytosol | 49.6 | 52.79 |
| CDY05953 | Canola | cytosol | 50.0 | 52.77 |
| CDY02111 | Canola | cytosol | 50.0 | 52.77 |
| CDX92755 | Canola | cytosol | 43.95 | 52.4 |
| CDX81296 | Canola | cytosol | 46.37 | 52.39 |
| CDY18674 | Canola | cytosol | 46.17 | 52.16 |
| CDY34015 | Canola | cytosol | 48.59 | 51.94 |
| CDX83146 | Canola | cytosol | 48.59 | 51.94 |
| CDY25639 | Canola | cytosol | 49.6 | 51.9 |
| CDX89520 | Canola | cytosol | 48.99 | 51.27 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 46.77 | 47.93 |
| CDY46931 | Canola | mitochondrion, plastid | 36.69 | 36.4 |
| CDX91604 | Canola | mitochondrion, plastid | 36.09 | 35.8 |
| CDY45474 | Canola | cytosol | 32.86 | 31.17 |
| CDY45965 | Canola | cytosol | 33.47 | 30.57 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 11.69 | 30.21 |
| CDY25780 | Canola | peroxisome | 16.33 | 20.1 |
| CDX91708 | Canola | peroxisome | 16.33 | 20.1 |
| CDY41452 | Canola | peroxisome | 18.15 | 18.83 |
| CDY44130 | Canola | cytosol | 17.94 | 18.62 |
| CDY04729 | Canola | cytosol | 17.94 | 18.62 |
| CDY66294 | Canola | cytosol | 17.94 | 18.5 |
| CDY61225 | Canola | peroxisome | 17.74 | 18.3 |
| CDX68271 | Canola | mitochondrion | 4.64 | 17.97 |
| CDY50645 | Canola | cytosol | 7.66 | 17.59 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.64 | 17.56 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.64 | 17.56 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.64 | 17.56 |
| CDY26256 | Canola | mitochondrion | 18.55 | 17.13 |
| CDX83914 | Canola | mitochondrion | 18.55 | 17.01 |
| CDX96776 | Canola | mitochondrion | 18.55 | 16.97 |
| CDY48485 | Canola | plastid | 18.35 | 16.85 |
| CDY21752 | Canola | mitochondrion | 18.55 | 16.82 |
| CDX81815 | Canola | mitochondrion | 18.55 | 16.76 |
| CDY12474 | Canola | peroxisome, plastid | 17.54 | 16.2 |
| CDY25781 | Canola | cytosol | 1.81 | 15.52 |
| CDY03822 | Canola | cytosol | 4.03 | 15.5 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 3.83 | 14.84 |
| CDX68272 | Canola | nucleus | 2.82 | 12.61 |
| CDX86161 | Canola | cytosol | 2.82 | 10.61 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078FQN0 | UniProt:A0A078FQN0 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY15174 | ProteinID:CDY15174 | ProteinID:CDY15174.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016847 |
| GO:GO:0030170 | GO:GO:0042218 | EnsemblPlantsGene:GSBRNA2T00085355001 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS |
| PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EDE81C | SEG:seg | : |
Description
BnaC05g00530DBnaC05g00530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQN0]
Coordinates
chrLK032052:-:303535..307065
Molecular Weight (calculated)
55467.4 Da
IEP (calculated)
8.039
GRAVY (calculated)
-0.205
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLKKSGGV NGAILSRIAT NDQHGENSEY FHGWKSYDKD PFHLSRNPHG VIQMGLAENQ LCLDLIKEWI KENPKASVCT PEGVHQFSDI ANFQDYHGLK
101: EFRQAIAHFM GKARGGRVTF DPERIVMSGG ATGANETIMF CLADPGDVFL VPSPYYAAFD RDLRWRTGVE IVPVHCSSSN NFKLTVEAVE WAYKKAVESN
201: KNVKGLLFTN PSNPLGTILD KDTLKNLVRF VTKKNIHLVV DEIYAATVFA GENFVSVAEV VKDSEVNADL IHIVYSLSKD MGLPGFRVGI VYSYNDSVVS
301: CARKMSSFGL VSSQTQFMLA SMLSDDSFVD NFLMESSKRL GIRHGVFTLG LKKAGINCLI STAGLFVWMD LRHLLRVRNS FESEIELWHI IIDKVKLNVS
401: PGSSFQCTEP GWFRVCFANM DDDTLHVALL RIQDFVSKNS NKTAEKASDN DQVIQNNNAK KQKWKQSNLR LSFRRLYEDG LSSPGIMSPH SPLLRT
101: EFRQAIAHFM GKARGGRVTF DPERIVMSGG ATGANETIMF CLADPGDVFL VPSPYYAAFD RDLRWRTGVE IVPVHCSSSN NFKLTVEAVE WAYKKAVESN
201: KNVKGLLFTN PSNPLGTILD KDTLKNLVRF VTKKNIHLVV DEIYAATVFA GENFVSVAEV VKDSEVNADL IHIVYSLSKD MGLPGFRVGI VYSYNDSVVS
301: CARKMSSFGL VSSQTQFMLA SMLSDDSFVD NFLMESSKRL GIRHGVFTLG LKKAGINCLI STAGLFVWMD LRHLLRVRNS FESEIELWHI IIDKVKLNVS
401: PGSSFQCTEP GWFRVCFANM DDDTLHVALL RIQDFVSKNS NKTAEKASDN DQVIQNNNAK KQKWKQSNLR LSFRRLYEDG LSSPGIMSPH SPLLRT
001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
Arabidopsis Description
ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.