Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000637.1-P | Field mustard | cytosol | 99.35 | 99.35 |
| CDY34015 | Canola | cytosol | 98.49 | 98.49 |
| AT4G08040.1 | Thale cress | cytosol | 90.52 | 91.3 |
| CDY66472 | Canola | cytosol | 60.56 | 69.73 |
| CDX75675 | Canola | cytosol | 65.95 | 67.85 |
| CDX69326 | Canola | cytosol | 66.81 | 66.1 |
| KRH61460 | Soybean | cytosol | 49.78 | 66.0 |
| CDY69462 | Canola | cytosol | 66.38 | 65.67 |
| VIT_18s0001g08520.t01 | Wine grape | nucleus | 65.09 | 64.67 |
| CDY23035 | Canola | cytosol | 64.87 | 64.59 |
| CDY05953 | Canola | cytosol | 65.3 | 64.47 |
| CDY02111 | Canola | cytosol | 65.3 | 64.47 |
| CDY08163 | Canola | cytosol | 65.09 | 64.26 |
| CDY25639 | Canola | cytosol | 64.66 | 63.29 |
| CDX89520 | Canola | cytosol | 64.44 | 63.08 |
| CDX81296 | Canola | cytosol | 59.27 | 62.64 |
| CDY18674 | Canola | cytosol | 59.05 | 62.41 |
| KRH52156 | Soybean | cytosol | 62.28 | 61.88 |
| Solyc04g077410.2.1 | Tomato | cytosol | 62.5 | 61.57 |
| PGSC0003DMT400012600 | Potato | cytosol | 61.64 | 61.24 |
| CDX89355 | Canola | cytosol | 54.09 | 56.03 |
| CDY42751 | Canola | cytosol | 54.31 | 55.88 |
| CDY71142 | Canola | cytosol | 53.88 | 55.8 |
| CDX94359 | Canola | cytosol | 53.88 | 55.8 |
| CDY72652 | Canola | cytosol | 23.49 | 54.23 |
| CDX92755 | Canola | cytosol | 48.49 | 54.09 |
| CDY13251 | Canola | cytosol | 52.16 | 49.29 |
| CDX86796 | Canola | cytosol | 51.72 | 49.18 |
| CDY11360 | Canola | cytosol | 49.57 | 48.63 |
| CDY15174 | Canola | cytosol | 51.94 | 48.59 |
| CDX90035 | Canola | cytosol | 46.77 | 48.55 |
| CDY65356 | Canola | cytosol | 49.14 | 48.2 |
| CDY46931 | Canola | mitochondrion, plastid | 38.58 | 35.8 |
| CDX91604 | Canola | mitochondrion, plastid | 38.36 | 35.6 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 14.22 | 34.38 |
| CDY45474 | Canola | cytosol | 34.91 | 30.98 |
| CDY45965 | Canola | cytosol | 35.34 | 30.2 |
| CDX68271 | Canola | mitochondrion | 5.82 | 21.09 |
| CDX91708 | Canola | peroxisome | 16.81 | 19.35 |
| CDY25780 | Canola | peroxisome | 16.59 | 19.11 |
| CDY41452 | Canola | peroxisome | 18.75 | 18.2 |
| CDY44130 | Canola | cytosol | 18.53 | 17.99 |
| CDY04729 | Canola | cytosol | 18.53 | 17.99 |
| CDY61225 | Canola | peroxisome | 17.89 | 17.26 |
| CDY66294 | Canola | cytosol | 17.89 | 17.26 |
| CDY26256 | Canola | mitochondrion | 18.75 | 16.2 |
| CDY48485 | Canola | plastid | 18.75 | 16.11 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.53 | 16.03 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.53 | 16.03 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.53 | 16.03 |
| CDY21752 | Canola | mitochondrion | 18.75 | 15.9 |
| CDX83914 | Canola | mitochondrion | 18.53 | 15.9 |
| CDX81815 | Canola | mitochondrion | 18.75 | 15.85 |
| CDY50645 | Canola | cytosol | 7.33 | 15.74 |
| CDY03822 | Canola | cytosol | 4.31 | 15.5 |
| CDX96776 | Canola | mitochondrion | 18.1 | 15.5 |
| CDY12474 | Canola | peroxisome, plastid | 17.89 | 15.46 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 3.88 | 14.06 |
| CDX68272 | Canola | nucleus | 3.23 | 13.51 |
| CDX86161 | Canola | cytosol | 3.02 | 10.61 |
| CDY25781 | Canola | cytosol | 1.29 | 10.34 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078D1B8 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDX83146 |
| ProteinID:CDX83146 | ProteinID:CDX83146.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00138673001 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF29 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EE643F | SEG:seg |
Description
BnaA03g23600D
Coordinates
chrLK031832:-:69976..71789
Molecular Weight (calculated)
52275.6 Da
IEP (calculated)
7.601
GRAVY (calculated)
-0.329
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSKVINES HGQDSSYFLG WQEYEKNPFH ETLNPSGIVQ MGLAENQLSF DLIESWLDDH PEVLGLKKNE ESVFKHLALF QDYHGLPAFK DAMAKFMEKI
101: RGSKVKFNTN KMVLTAGSTS ANETLMFCLA NPGDAFLIPA PYYPGFDRDL KWRTGVEIVP INCVSSNGYK ITKEALEDAY ERAHKLNLNV KGVLITNPSN
201: PLGTSTTRGE LDLLLTFTSA KKIHMVSDEI YSGTVFDSPE FTSVLEVAKD KNMDLDEKIH VVYSLSKDLG LPGFRVGLIY SNNEKVVSAA TKMSSFGLIS
301: SQTQHLLANL LSDERFTTKY LEVNRKRLRE RRDRLVSGLK KAGIGCLKSN GGLFCWVDLR HLLKSNTFEA EHSLWTKIVC EVGLNISPGS SCHSDEPGWF
401: RVCFANMSDQ TLEVAMDRVH GFVEAMVMNT NHGKQKRTMW DSRRRSLINK WVSKLSSVQC ESER
101: RGSKVKFNTN KMVLTAGSTS ANETLMFCLA NPGDAFLIPA PYYPGFDRDL KWRTGVEIVP INCVSSNGYK ITKEALEDAY ERAHKLNLNV KGVLITNPSN
201: PLGTSTTRGE LDLLLTFTSA KKIHMVSDEI YSGTVFDSPE FTSVLEVAKD KNMDLDEKIH VVYSLSKDLG LPGFRVGLIY SNNEKVVSAA TKMSSFGLIS
301: SQTQHLLANL LSDERFTTKY LEVNRKRLRE RRDRLVSGLK KAGIGCLKSN GGLFCWVDLR HLLKSNTFEA EHSLWTKIVC EVGLNISPGS SCHSDEPGWF
401: RVCFANMSDQ TLEVAMDRVH GFVEAMVMNT NHGKQKRTMW DSRRRSLINK WVSKLSSVQC ESER
001: MLSSKVVGDS HGQDSSYFLG WQEYEKNPFH ESFNTSGIVQ MGLAENQLSF DLIEKWLEEH PEVLGLKKND ESVFRQLALF QDYHGLPAFK DAMAKFMGKI
101: RENKVKFDTN KMVLTAGSTS ANETLMFCLA NPGDAFLIPA PYYPGFDRDL KWRTGVEIVP IHCVSSNGYK ITEDALEDAY ERALKHNLNV KGVLITNPSN
201: PLGTSTTREE LDLLLTFTST KKIHMVSDEI YSGTVFDSPE FTSVLEVAKD KNMGLDGKIH VVYSLSKDLG LPGFRVGLIY SNNEKVVSAA TKMSSFGLIS
301: SQTQHLLANL LSDERFTTNY LEENKKRLRE RKDRLVSGLK EAGISCLKSN AGLFCWVDLR HLLKSNTFEA EHSLWTKIVC EVGLNISPGS SCHCDEPGWF
401: RVCFANMSDQ TMEVAMDRVK GFVDNNNGGK QKRTMWDTRR RSLINKWVSK LSSVTCESER
101: RENKVKFDTN KMVLTAGSTS ANETLMFCLA NPGDAFLIPA PYYPGFDRDL KWRTGVEIVP IHCVSSNGYK ITEDALEDAY ERALKHNLNV KGVLITNPSN
201: PLGTSTTREE LDLLLTFTST KKIHMVSDEI YSGTVFDSPE FTSVLEVAKD KNMGLDGKIH VVYSLSKDLG LPGFRVGLIY SNNEKVVSAA TKMSSFGLIS
301: SQTQHLLANL LSDERFTTNY LEENKKRLRE RKDRLVSGLK EAGISCLKSN AGLFCWVDLR HLLKSNTFEA EHSLWTKIVC EVGLNISPGS SCHCDEPGWF
401: RVCFANMSDQ TMEVAMDRVK GFVDNNNGGK QKRTMWDTRR RSLINKWVSK LSSVTCESER
Arabidopsis Description
ACS111-aminocyclopropane-1-carboxylate synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9U6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.