Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65800.1 | CDY18003 | AT4G02680.1 | 15118728 |
| AT5G65800.1 | CDY66290 | AT4G02680.1 | 15118728 |
| AT5G65800.1 | CDY14376 | AT5G58550.1 | 15118728 |
| AT5G65800.1 | CDY32974 | AT5G58550.1 | 15118728 |
| AT5G65800.1 | CDY66209 | AT5G58550.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18674 | Canola | cytosol | 99.54 | 99.54 |
| Bra037829.1-P | Field mustard | cytosol | 99.09 | 99.09 |
| AT5G65800.1 | Thale cress | cytosol | 97.72 | 91.28 |
| CDY02111 | Canola | cytosol | 91.34 | 85.32 |
| CDY23035 | Canola | cytosol | 89.98 | 84.76 |
| CDY08163 | Canola | cytosol | 90.43 | 84.47 |
| CDY05953 | Canola | cytosol | 89.98 | 84.04 |
| CDY66472 | Canola | cytosol | 67.2 | 73.2 |
| Solyc02g063540.1.1 | Tomato | cytosol | 47.15 | 72.89 |
| CDX75675 | Canola | cytosol | 74.72 | 72.73 |
| CDX69326 | Canola | cytosol | 77.22 | 72.28 |
| CDY69462 | Canola | cytosol | 76.31 | 71.43 |
| VIT_00s0840g00010.t01 | Wine grape | cytosol | 74.72 | 69.94 |
| VIT_00s1437g00010.t01 | Wine grape | cytosol | 74.72 | 69.94 |
| PGSC0003DMT400055203 | Potato | cytosol | 74.49 | 69.72 |
| Solyc02g091990.2.1 | Tomato | cytosol | 74.26 | 69.51 |
| CDY25639 | Canola | cytosol | 74.26 | 68.78 |
| CDX89520 | Canola | cytosol | 73.58 | 68.14 |
| PGSC0003DMT400008587 | Potato | cytosol | 71.53 | 68.11 |
| KRH77167 | Soybean | cytosol | 72.21 | 67.45 |
| KRH28319 | Soybean | cytosol | 71.98 | 67.09 |
| PGSC0003DMT400008605 | Potato | cytosol | 64.46 | 66.9 |
| Solyc03g043890.2.1 | Tomato | cytosol | 71.75 | 66.88 |
| KRH04373 | Soybean | cytosol | 71.53 | 66.11 |
| PGSC0003DMT400013977 | Potato | cytosol | 56.04 | 65.95 |
| GSMUA_Achr2P08600_001 | Banana | cytosol | 69.25 | 65.66 |
| KRH58165 | Soybean | cytosol | 70.84 | 64.79 |
| GSMUA_Achr3P25830_001 | Banana | mitochondrion | 65.83 | 64.37 |
| GSMUA_Achr5P08880_001 | Banana | cytosol | 67.88 | 63.95 |
| GSMUA_Achr1P14280_001 | Banana | nucleus | 66.06 | 63.46 |
| GSMUA_Achr4P01340_001 | Banana | mitochondrion | 65.6 | 62.34 |
| GSMUA_Achr1P04420_001 | Banana | cytosol | 64.24 | 61.04 |
| CDY34015 | Canola | cytosol | 63.1 | 59.7 |
| CDX83146 | Canola | cytosol | 62.64 | 59.27 |
| Zm00001d033862_P001 | Maize | cytosol | 63.1 | 57.11 |
| CDY72652 | Canola | cytosol | 25.97 | 56.72 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 62.64 | 56.7 |
| TraesCS4A01G256500.1 | Wheat | cytosol | 62.64 | 56.7 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 62.19 | 56.29 |
| Os03t0727600-01 | Rice | cytosol | 62.19 | 56.06 |
| EER90948 | Sorghum | cytosol | 63.33 | 55.94 |
| CDX89355 | Canola | cytosol | 53.53 | 52.46 |
| CDY71142 | Canola | cytosol | 53.3 | 52.23 |
| CDY42751 | Canola | cytosol | 53.53 | 52.11 |
| CDX94359 | Canola | cytosol | 52.85 | 51.79 |
| CDX92755 | Canola | cytosol | 47.38 | 50.0 |
| CDY11360 | Canola | cytosol | 51.25 | 47.57 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 61.73 | 47.46 |
| CDY65356 | Canola | cytosol | 50.8 | 47.15 |
| CDY15174 | Canola | cytosol | 52.39 | 46.37 |
| CDX86796 | Canola | cytosol | 51.03 | 45.9 |
| CDX90035 | Canola | cytosol | 46.47 | 45.64 |
| CDY13251 | Canola | cytosol | 50.8 | 45.42 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 17.77 | 40.62 |
| CDY46931 | Canola | mitochondrion, plastid | 39.41 | 34.6 |
| CDX91604 | Canola | mitochondrion, plastid | 39.41 | 34.6 |
| CDY45474 | Canola | cytosol | 35.31 | 29.64 |
| CDY45965 | Canola | cytosol | 35.99 | 29.1 |
| CDX91708 | Canola | peroxisome | 17.54 | 19.11 |
| CDY25780 | Canola | peroxisome | 17.54 | 19.11 |
| CDX68271 | Canola | mitochondrion | 5.24 | 17.97 |
| CDY04729 | Canola | cytosol | 19.13 | 17.57 |
| CDY41452 | Canola | peroxisome | 19.13 | 17.57 |
| CDY44130 | Canola | cytosol | 19.13 | 17.57 |
| CDY66294 | Canola | cytosol | 18.91 | 17.26 |
| CDY61225 | Canola | peroxisome | 18.68 | 17.05 |
| CDX96776 | Canola | mitochondrion | 19.36 | 15.68 |
| CDY26256 | Canola | mitochondrion | 19.13 | 15.64 |
| CDY48485 | Canola | plastid | 19.13 | 15.56 |
| CDY21752 | Canola | mitochondrion | 19.36 | 15.54 |
| CDX83914 | Canola | mitochondrion | 19.13 | 15.53 |
| CDX81815 | Canola | mitochondrion | 19.36 | 15.48 |
| CDY12474 | Canola | peroxisome, plastid | 18.45 | 15.08 |
| CDY50645 | Canola | cytosol | 7.29 | 14.81 |
| CDY03822 | Canola | cytosol | 4.33 | 14.73 |
| CDX68272 | Canola | nucleus | 3.64 | 14.41 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.1 | 14.06 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDY25781 | Canola | cytosol | 1.59 | 12.07 |
| CDX86161 | Canola | cytosol | 3.42 | 11.36 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:50.4.4 | GO:A0A078CVZ6 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDX81296 |
| ProteinID:CDX81296 | ProteinID:CDX81296.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00134822001 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF10 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EDE9F9 | SEG:seg |
Description
BnaC09g07070D
Coordinates
chrLK031824:-:823028..824628
Molecular Weight (calculated)
49850.7 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.349
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEMKNPNGM IQMGLAENQL CFDLIESWLA KNQDAASLKR NGQSIFRELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQALKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL QDKKLGNTEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLRHLLDTN TFEAELDLWK KIVYNVKLNI SPGSSCHCTE PGWFRVCFAN MSEDTLDLAL KRLKTFVEST
401: DCGRMISRKS HERLKSLRKK TVSNWVFRVS WSDRVPDER
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQALKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL QDKKLGNTEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLRHLLDTN TFEAELDLWK KIVYNVKLNI SPGSSCHCTE PGWFRVCFAN MSEDTLDLAL KRLKTFVEST
401: DCGRMISRKS HERLKSLRKK TVSNWVFRVS WSDRVPDER
001: MVQLSRKATC NSHGQVSSYF LGWEEYEKNP YDVTKNPQGI IQMGLAENQL CFDLLESWLA QNTDAACFKR DGQSVFRELA LFQDYHGLSS FKNAFADFMS
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER
Arabidopsis Description
ACS41-aminocyclopropane-1-carboxylate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q43309]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.