Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | CDX81296 | AT5G65800.1 | 15118728 |
| AT5G58550.1 | CDY18674 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022691.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| Os03t0294700-01 | Rice | cytosol | 63.93 | 7.26 |
| CDY32974 | Canola | plastid | 86.89 | 5.75 |
| CDY66209 | Canola | plastid | 86.89 | 5.73 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 6.56 | 5.63 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 85.25 | 5.62 |
| KRH30203 | Soybean | plastid | 75.41 | 4.92 |
| KRG98245 | Soybean | plastid | 73.77 | 4.83 |
| CDY66290 | Canola | cytosol, plastid | 65.57 | 4.81 |
| CDY18003 | Canola | cytosol | 65.57 | 4.81 |
| KRH72722 | Soybean | cytosol, plastid | 73.77 | 4.8 |
| KRH17084 | Soybean | plastid | 73.77 | 4.71 |
| CDY14472 | Canola | cytosol | 68.85 | 4.67 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 70.49 | 4.64 |
| Solyc09g055310.2.1 | Tomato | cytosol | 68.85 | 4.62 |
| CDX74897 | Canola | plastid | 68.85 | 4.61 |
| CDX91443 | Canola | cytosol, plastid | 68.85 | 4.59 |
| CDX78038 | Canola | cytosol | 68.85 | 4.57 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 72.13 | 4.56 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 72.13 | 4.54 |
| CDX90635 | Canola | cytosol | 68.85 | 4.52 |
| CDY29045 | Canola | cytosol | 68.85 | 4.49 |
| CDX73693 | Canola | cytosol | 68.85 | 4.45 |
| CDY07743 | Canola | cytosol, plastid | 67.21 | 4.39 |
| Zm00001d028769_P004 | Maize | plastid | 67.21 | 4.24 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 63.93 | 4.05 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 63.93 | 4.04 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 63.93 | 4.03 |
| Zm00001d047721_P001 | Maize | plastid | 63.93 | 4.02 |
| EER95025 | Sorghum | plastid | 62.3 | 3.93 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 62.3 | 3.93 |
Protein Annotations
| EnsemblPlants:CDY14376 | EnsemblPlantsGene:GSBRNA2T00079007001 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF1 | ProteinID:CDY14376 | ProteinID:CDY14376.1 |
| UniParc:UPI0002546A2D | UniProt:A0A078FMQ9 | MapMan:35.1 | : | : | : |
Description
BnaA10g06790DBnaA10g06790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMQ9]
Coordinates
chrLK032042:-:493711..494098
Molecular Weight (calculated)
7084.6 Da
IEP (calculated)
9.120
GRAVY (calculated)
-0.625
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MTKLIEKAFS KAAAYEKRSE YCEREKAKED LDMATTLDPL RTYPYRYRAA GKLNSSLCLL M
001: MRNLKLFERF KSTQVHAFTT QDSPSTSSNG SPRMMKFLGH PKSKSRSLLP HGFPTTDLLE PPLDSYLKPI DLVESLSNLY RRIESSSESE ASMLYLEQYA
101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF
201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE
301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE
401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL
501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW
601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF
701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS
801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH
901: TETLHLYSRS KDQASSIDNT IFGLD
101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF
201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE
301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE
401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL
501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW
601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF
701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS
801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH
901: TETLHLYSRS KDQASSIDNT IFGLD
Arabidopsis Description
EOL2ETO1-like 2 [Source:TAIR;Acc:AT5G58550]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.