Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d033862_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | Zm00001d033862_P001 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028769_P004 | Maize | plastid | 90.53 | 90.81 |
| Os03t0294700-01 | Rice | cytosol | 46.03 | 83.24 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 75.18 | 75.73 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 75.28 | 75.52 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 74.87 | 75.34 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 74.77 | 75.08 |
| Bra022691.1-P | Field mustard | cytosol | 4.02 | 63.93 |
| CDY14376 | Canola | cytosol | 4.02 | 63.93 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 62.2 | 62.33 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 4.53 | 61.97 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 61.59 | 61.97 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 55.41 | 56.57 |
| CDX90635 | Canola | cytosol | 54.17 | 56.56 |
| CDX91443 | Canola | cytosol, plastid | 53.24 | 56.5 |
| AT3G51770.2 | Thale cress | cytosol | 55.61 | 56.31 |
| CDX78038 | Canola | cytosol | 53.24 | 56.26 |
| Bra005123.1-P | Field mustard | plastid | 52.73 | 56.08 |
| CDX74897 | Canola | plastid | 52.42 | 55.87 |
| Bra012838.1-P | Field mustard | cytosol | 53.04 | 55.86 |
| KRH76003 | Soybean | cytosol | 54.79 | 55.77 |
| CDY29045 | Canola | cytosol | 53.55 | 55.62 |
| Bra006875.1-P | Field mustard | cytosol | 53.86 | 55.58 |
| CDY14472 | Canola | cytosol | 51.49 | 55.56 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 52.94 | 55.45 |
| KRH65637 | Soybean | cytosol | 54.69 | 55.31 |
| CDY07743 | Canola | cytosol, plastid | 53.14 | 55.25 |
| Bra000048.1-P | Field mustard | cytosol, plastid | 53.14 | 55.25 |
| CDX73693 | Canola | cytosol | 53.55 | 55.14 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 52.83 | 54.63 |
| Solyc09g055310.2.1 | Tomato | cytosol | 50.67 | 54.07 |
| Solyc10g076450.1.1 | Tomato | cytosol | 52.83 | 54.06 |
| PGSC0003DMT400041081 | Potato | cytosol | 52.52 | 53.85 |
| KRH72722 | Soybean | cytosol, plastid | 49.95 | 51.76 |
| KRG98245 | Soybean | plastid | 49.12 | 51.18 |
| KRH30203 | Soybean | plastid | 49.02 | 50.91 |
| KRH17084 | Soybean | plastid | 49.02 | 49.84 |
| CDY32974 | Canola | plastid | 47.17 | 49.67 |
| CDY66209 | Canola | plastid | 46.65 | 48.97 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 46.14 | 48.43 |
| Bra002638.1-P | Field mustard | plastid | 45.93 | 48.37 |
| Zm00001d018939_P001 | Maize | cytosol | 43.36 | 47.41 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 43.67 | 46.75 |
| Zm00001d007522_P023 | Maize | cytosol | 40.47 | 43.62 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | ProteinID:AQL07392.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:K7WEB9 | PFAM:PF13176 |
| PFscan:PS50293 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF54695 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000220AFF9 | EnsemblPlantsGene:Zm00001d047721 |
| EnsemblPlants:Zm00001d047721_P001 | EnsemblPlants:Zm00001d047721_T001 | SEG:seg | : | : | : |
Description
tetratricopeptide repeat (TPR)-containing protein
Coordinates
chr9:-:139936542..139944469
Molecular Weight (calculated)
107491.0 Da
IEP (calculated)
5.357
GRAVY (calculated)
-0.269
Length
971 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNFVTTIK SLKLIEGCKA AQLYALSSVG AASTSGSADA GGSSMGKPQP PPPPKTISMR SGSLYYPHTA PSTSGSFVPE PHLPCGLPVA DALEPALDAC
101: LRPVDHVGAL AASYRRVSAA TSGSDDDLCD AYLEQHALFQ SIGDAQLIRG ALRAARVHAD NPHRRAVLAA WLRYERREDE LDPAPPPLAP CTATTPMLEC
201: PRAAVFASVS HSVDPASPCP CRRPSHSLVV PPPHRLRRST LGLGAASEMS EEEEPETNDL WFIIGEEEVA CERSCIAALS KPLNTLLYGG FAEAHRDRID
301: FSRDGITPRG MRAVSAYSRH GRVDDFPPDI ISQLLAFANK FCCEGLKADC DNRLAAMVRG LDDARTLIDI GLEEASHLLV ASCLQAFLRE LPKSLTHLDI
401: ARLLCSPQGR ERLDVSGNAS FALYYFLSYV AMEQDMRSNT TVMLLERLNE FAEQPWQKQL ALHQLGCVML QRGEFEEAQE WYEAAVAEAH VYSLAGEARA
501: KYKRGHKYAA YKLMNSVVGD YDEPAGWMYQ ERSLYCVGKE KLADLQAATE LDPTMTFPYK YRACTLLEED NAESAVAEIS KVVGFKMATD CLELRAWFYL
601: ALEQCELAVQ DVRAILTLDP TYMMFHGRMH GEQLIELLRG QVRQWDMADC WMQLYDRWSV VDDIGSLAVV QQMLAREPGN SSLRFRQSLL LLRLNCQKAA
701: MRSLRCARNS SLHEHERLVY EGWILYDSGH REEALAKAQQ SIGLQRSFEA FFLKAYALGD SSLDTDSSLS VVQLLEHANS CASDNLRKGQ AYNNMGSTYV
801: DCNMLDEAAE CYGIALNIKH TRAHQGLARV HFLKNRKKAA FEEMTKLVQI ATNSASAYEK RSEYGERDAA RSDLDTATLL DPTRTYPYRY RAAVLMDEGK
901: EEEAIAELSG AIAFKPDLQL LHLRAAFFDS MGDSESALRD CEAALCLDPT HGDTLELYSK ASTKAGTETE S
101: LRPVDHVGAL AASYRRVSAA TSGSDDDLCD AYLEQHALFQ SIGDAQLIRG ALRAARVHAD NPHRRAVLAA WLRYERREDE LDPAPPPLAP CTATTPMLEC
201: PRAAVFASVS HSVDPASPCP CRRPSHSLVV PPPHRLRRST LGLGAASEMS EEEEPETNDL WFIIGEEEVA CERSCIAALS KPLNTLLYGG FAEAHRDRID
301: FSRDGITPRG MRAVSAYSRH GRVDDFPPDI ISQLLAFANK FCCEGLKADC DNRLAAMVRG LDDARTLIDI GLEEASHLLV ASCLQAFLRE LPKSLTHLDI
401: ARLLCSPQGR ERLDVSGNAS FALYYFLSYV AMEQDMRSNT TVMLLERLNE FAEQPWQKQL ALHQLGCVML QRGEFEEAQE WYEAAVAEAH VYSLAGEARA
501: KYKRGHKYAA YKLMNSVVGD YDEPAGWMYQ ERSLYCVGKE KLADLQAATE LDPTMTFPYK YRACTLLEED NAESAVAEIS KVVGFKMATD CLELRAWFYL
601: ALEQCELAVQ DVRAILTLDP TYMMFHGRMH GEQLIELLRG QVRQWDMADC WMQLYDRWSV VDDIGSLAVV QQMLAREPGN SSLRFRQSLL LLRLNCQKAA
701: MRSLRCARNS SLHEHERLVY EGWILYDSGH REEALAKAQQ SIGLQRSFEA FFLKAYALGD SSLDTDSSLS VVQLLEHANS CASDNLRKGQ AYNNMGSTYV
801: DCNMLDEAAE CYGIALNIKH TRAHQGLARV HFLKNRKKAA FEEMTKLVQI ATNSASAYEK RSEYGERDAA RSDLDTATLL DPTRTYPYRY RAAVLMDEGK
901: EEEAIAELSG AIAFKPDLQL LHLRAAFFDS MGDSESALRD CEAALCLDPT HGDTLELYSK ASTKAGTETE S
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.