Factsheet for Solyc10g076450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041081	Potato	cytosol	93.47	93.66
VIT_08s0058g00260.t01	Wine grape	cytosol	73.45	73.29
KRH76003	Soybean	cytosol	69.44	69.08
AT3G51770.2	Thale cress	cytosol	69.55	68.82
Bra006875.1-P	Field mustard	cytosol	68.18	68.76
CDX78038	Canola	cytosol	66.49	68.66
CDY29045	Canola	cytosol	67.44	68.45
CDX90635	Canola	cytosol	66.91	68.28
Bra012838.1-P	Field mustard	cytosol	66.28	68.22
CDX73693	Canola	cytosol	67.76	68.19
CDX91443	Canola	cytosol, plastid	65.54	67.98
KRH65637	Soybean	cytosol	68.49	67.71
CDY14472	Canola	cytosol	64.17	67.67
CDX74897	Canola	plastid	64.91	67.62
Os03t0294700-01	Rice	cytosol	38.25	67.6
Bra005123.1-P	Field mustard	plastid	64.59	67.14
CDY07743	Canola	cytosol, plastid	65.86	66.92
Bra000048.1-P	Field mustard	cytosol, plastid	65.65	66.7
Solyc09g055310.2.1	Tomato	cytosol	57.22	59.67
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	60.48	59.24
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	58.27	57.31
TraesCS4D01G193600.2	Wheat	cytosol, plastid	56.06	55.19
TraesCS4A01G111500.1	Wheat	cytosol, plastid	56.27	55.17
TraesCS4B01G192300.1	Wheat	cytosol, plastid	55.85	54.92
HORVU4Hr1G055900.5	Barley	cytosol, plastid	55.64	54.6
Zm00001d028769_P004	Maize	plastid	54.9	53.82
EER95025	Sorghum	plastid	54.58	53.62
Zm00001d047721_P001	Maize	plastid	54.06	52.83
Solyc09g065640.2.1	Tomato	cytosol	45.73	48.98

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4D1Y7	PFAM:PF13181
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc10g076450.1	EnsemblPlants:Solyc10g076450.1.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0002769D8A	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:59423425..59427399

Molecular Weight (calculated)

108111.0 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.344

Length

949 amino acids

Sequence
(BLAST)

001: MQHNIFATMR SLNMIEGCKG TQIYAFNQSG KTTTNGYGGV GEKFLQHLHE RVNSVRSKSN RNYQAMQPKD NAVLVEALAS YGIPQTDFIE PQIESYLKSV
101: NFVETLADVY RRMKGCSMFE ISGMYLEQCA IFKGLSDPKL FRKCLKSGRE HAVDVHSKVV LSAWLRFDRR EDELIGVSAM DCCGRSIECP RSSLVSGYNP
201: ELATDPCSCH QRPVQDEDTE VFVGDDECST SISHGYEEED YDMSFCIGEE EVRCRRFNMA SLSRPFEVML YDGFMESRRE KINFSQNGIS AKGMKAAEMF
301: SRTKSVESFD PETVLELLSL ANKFCCIEMK SACDAYLASL VFDMDSAMLL IEYGLEETAY VLVAACLQVL LRELPNSMHN PNVSRLFCSS EGKDRLASAG
401: HASFLLYYFL TQTAMEEDMK SNTTVMLLER LGEFSSLGWQ KQLAFHQLGC VMLERKEYKD AQKWFEAAVE AGHVYSLAGI ARAKYKRGHM YKAYKLMNSL
501: ISDCTPCGWM YQERSLYCHG KEKTMDLSTA TELDPTLSYP YKYRAMSMVE ENRTEAAISE IDKIIGFKVS PDCLELRAWF LIALEDYEGA LRDVRALLTL
601: DPQYVMFHGK LQGDKLVELL CHTVQQRNQA DCWMQLYDRW SSVDDIGSLG VVHHMLANDP GKSLLLFRQS LLLLRLNSHR AAMRSLREAR NQATTEYERL
701: VYEGWILYDT GYREEAISKA EQSISIQRSF EAFFLKAYVL SETNSDSESS LYVIQLLEEA LRCPSDGLRK GQALSNLASI YVDVDKLDNA IDCYVNALTI
801: KHTRAHQGLA RVYHLKNQRK AAYDEMTKLI EKASYNASAY EKRSEYCDRE LAKSDLTMAT KLDPLRTYPY RYKAAVLMDD HKESEAISEL TKVIAFKPDL
901: HLLHLRAAFH DSMNEPTSTI RDCEAALCLD SSHADTLELY SKARQRSNE

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.