CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90948

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58550.1	EER90948	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028769_P004	Maize	plastid	92.86	92.67
Os03t0294700-01	Rice	cytosol	46.58	83.8
TraesCS4D01G193600.2	Wheat	cytosol, plastid	77.02	77.18
TraesCS4B01G192300.1	Wheat	cytosol, plastid	76.29	76.37
HORVU4Hr1G055900.5	Barley	cytosol, plastid	76.4	76.32
TraesCS4A01G111500.1	Wheat	cytosol, plastid	76.4	76.24
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	63.46	63.52
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	63.66	63.47
Bra022691.1-P	Field mustard	cytosol	3.93	62.3
CDY14376	Canola	cytosol	3.93	62.3
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	4.35	59.15
CDX91443	Canola	cytosol, plastid	54.24	57.27
VIT_08s0058g00260.t01	Wine grape	cytosol	56.31	57.2
CDX90635	Canola	cytosol	54.76	56.88
CDX74897	Canola	plastid	53.42	56.64
Bra005123.1-P	Field mustard	plastid	53.52	56.63
CDX78038	Canola	cytosol	53.62	56.37
AT3G51770.2	Thale cress	cytosol	55.9	56.31
Bra012838.1-P	Field mustard	cytosol	53.62	56.18
CDY14472	Canola	cytosol	52.17	56.0
CDY29045	Canola	cytosol	54.14	55.94
VIT_06s0004g07020.t01	Wine grape	cytosol	53.62	55.88
KRH76003	Soybean	cytosol	55.18	55.87
Bra006875.1-P	Field mustard	cytosol	54.14	55.58
CDY07743	Canola	cytosol, plastid	53.73	55.57
Bra000048.1-P	Field mustard	cytosol, plastid	53.73	55.57
KRH65637	Soybean	cytosol	55.07	55.42
Solyc09g055310.2.1	Tomato	cytosol	51.86	55.05
CDX73693	Canola	cytosol	53.73	55.04
PGSC0003DMT400068499	Potato	cytosol, plastid	53.42	54.95
Solyc10g076450.1.1	Tomato	cytosol	53.62	54.58
PGSC0003DMT400041081	Potato	cytosol	53.21	54.28
KRH72722	Soybean	cytosol, plastid	51.14	52.72
KRG98245	Soybean	plastid	50.1	51.93
KRH30203	Soybean	plastid	49.79	51.44
KRH17084	Soybean	plastid	49.79	50.37
CDY32974	Canola	plastid	47.52	49.78
CDY66209	Canola	plastid	47.1	49.19
Bra002638.1-P	Field mustard	plastid	46.27	48.48
AT5G58550.1	Thale cress	cytosol, mitochondrion, plastid	46.38	48.43
EES08750	Sorghum	cytosol	44.31	48.09
EER95939	Sorghum	cytosol	43.79	47.64

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	EntrezGene:8084029	UniProt:C5WNH6	EnsemblPlants:EER95025
ProteinID:EER95025	ProteinID:EER95025.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13176	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF3
InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	EnsemblPlantsGene:SORBI_3001G405100	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A82FD9	RefSeq:XP_002468027.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:68967428..68972924

Molecular Weight (calculated)

107175.0 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.281

Length

966 amino acids

Sequence
(BLAST)

001: MTNNFLTTIK SLKLIEGCKA AQLYALSSVG ASTSGSADSG VSSIGKPHPP PPPKAISMRS GSLYYPHAAP STSGAFVPEP HLPCGLPVAD ALEPALDACL
101: RPVDHVGALA ASYRRVSAAT SGADDDLCDA YLEQHALFQS IGDARLIRRA LRAARVHADN PHRRAVLAAW LRYQRREDEL DPAPPPLAPC TATTPLLECP
201: RAAVFASVSH SVDPVCPCRR PPPPPVTPPP HRLRRSTSAA ASEMSEEEEP ETNDLWFIIG EEEVACDRSC IAALSKPLNT LLYGGFAEAH RDRIDFSRDG
301: ITPRGMRAVS AYSRHGRVDD FPPDIISQLL AFANKFCCEG LKAACDNQLA AMVRGLDNAR SLIDIGLEEA SHLLVASCLQ AFLRELPKSL TYPDIARLLC
401: SPEGRERLDI SGNASFALYY FLSYVAMEQD MRSNTTVMLL ERLNEFAEQP WQKQLALHQL GCVMLQRGEF EEAQEWFEAA VAEGHVYSLA GEARAKYKRG
501: HKYAAYKLMN SVVGDYDEPA GWMYQERSLY CVGKEKLADL QAATELDPTM TFPYKYRACA LLEEDNAESA VAEISKVVGF KMATDCLELR AWFYLALEQC
601: ELAVQDVRAI LTLDPTYMMF HGRMHGEQLI ELLRGQVRQW DMADCWMELY DRWSAVDDIG SLAVVQQMLA REPGNSSLRF RQSLLLLRLN CQKAAMRSLR
701: YARNSSLHEH ERLVYEGWIL YDSGHRDEAL AKAEQSIGLQ RSFEAFFLKA YALGDSSLDT ESSLSVVQLL EHANSCASDN LRKGQAYNNM GSIYVDCDML
801: DEAAECYGIA LNIKHTRAHQ GLARVHYLKN RKKVAYEEMT KLVQIASNSA SAYEKRSEYG ERDAARNDLN TATLLDPTRT YPYRYRAAVL MDEGKEEEAI
901: AELSGAIAFK PDVQLLHLRA AFFDSMGDTE SALRDCEAAL CLDPTHGDTL ELYSKASSTK ADEPQS

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.