CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90948

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02680.1	EER90948	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0585900-01	Rice	cytosol	90.11	93.58
Zm00001d052974_P002	Maize	cytosol, extracellular, nucleus	92.7	90.96
TraesCS2B01G592500.1	Wheat	cytosol	90.67	90.88
TraesCS2D01G562900.1	Wheat	cytosol	90.56	90.77
HORVU2Hr1G119180.1	Barley	cytosol	90.34	90.54
TraesCS2A01G591300.1	Wheat	cytosol	90.0	89.1
Zm00001d007522_P023	Maize	cytosol	89.21	88.12
VIT_00s0179g00100.t01	Wine grape	cytosol	72.7	73.02
Solyc09g065640.2.1	Tomato	cytosol	71.24	71.56
PGSC0003DMT400049804	Potato	cytosol	70.9	71.22
Bra000868.1-P	Field mustard	cytosol	64.94	69.55
CDY66290	Canola	cytosol, plastid	64.72	69.23
CDY18003	Canola	cytosol	64.27	68.75
EER95939	Sorghum	cytosol	67.42	67.57
AT4G02680.1	Thale cress	cytosol	67.42	67.57
KRH71376	Soybean	cytosol	66.74	67.04
KRH67265	Soybean	cytosol	66.85	67.0
KRH32058	Soybean	cytosol	66.07	66.29
VIT_00s0233g00080.t01	Wine grape	cytosol	16.97	63.18
KRG95578	Soybean	cytosol	66.63	62.55
VIT_18s0089g00540.t01	Wine grape	cytosol	8.09	56.69
EER95025	Sorghum	plastid	48.09	44.31

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	EntrezGene:8062672	UniProt:C5Y5B4	ncoils:Coil
EnsemblPlants:EES08750	ProteinID:EES08750	ProteinID:EES08750.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR44203	PANTHER:PTHR44203:SF2	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	EnsemblPlantsGene:SORBI_3005G167300	SUPFAM:SSF48452
SUPFAM:SSF54695	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A8637B	RefSeq:XP_002449762.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:64524099..64529952

Molecular Weight (calculated)

100304.0 Da

IEP (calculated)

6.442

GRAVY (calculated)

-0.173

Length

890 amino acids

Sequence
(BLAST)

001: MRKLFFSESA CKETKLHSAP HSWLPLERGK LSKFSGHAAA SSSIDSLMKM PEPAVLPHFK PADYVDILAQ IHEELESCSP DEKSCLYLLQ FQVFRGLGEA
101: KLSRRSLQSA WEKASTIHEK LIFGAWLKYE KKGEEAIADL LSSCGKCSQE FRLLDFVSQV STGSHVMSYD DDDDESDEFQ GSAVVHFRIR DDMIACDRRK
201: LAALSTPLYA MLNGGFRESY LEVIDMSRNG ISPIGMRAIS KFSLSGRLPY LSADAILEML DFANKFCCKG LKDACERKLA SFVSSRQDAI DFMECALELG
301: CSILAASCLQ VLLNELPECL NDEQVVRIFS SANKAQRLTM VGNASFSLYC LLSEVSMSTN PTSDVTVSFL EKLVESASDS RQKQLALHQL ACTRFLRKDY
401: PESERLFNAA FSAGHLYSLV GLARLAALRG NKHFALKFLD SVMSSRWPLG WMYQERALYL EGDNKLENLN KATELDPTLT YPYMFRAASL MKRQSVEAAL
501: MEINRILGFK LVLECLELRF CCYLALEDYR AALCDVQAIL TLAPDYRMIG GRVAAKQLRM LVLENVEQWT AADCWMQLYD RWSSVDDIGS LSVIYQMLES
601: DNAKGVLYFR QSLLLLRLNC PEAAMRSLQL AREHASSDHE RLVYEGWILY DTGHCEEGLQ KAEASIAIQR SFEAFFLKAY ALADSSLDPS TSATVVSLLE
701: DALRCPSDRL RKGQALNNLG SVYVDCGKLD LAAECYINAL KIGHTRAHQG LARVHFLRNN RAGAYDEMTK LIEKARNNAS AYEKRSEYCD RELTKTDLQM
801: VTKLDPLRVY PYRYRAAVLM DNHKEKEAIA ELTKAIAFKA DLNLLHLRAA FHEHIGDISS ALRDCRAALS VDPNHQEMLE LHHRVNSQEP

Best Arabidopsis Sequence Match ( AT4G02680.1 )
(BLAST)

001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP

Arabidopsis Description

EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.