Factsheet for TraesCS2A01G591300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G256500.1
TraesCS4B01G058200.1
TraesCS4D01G058200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02680.1	TraesCS4A01G256500.1	AT5G65800.1	15118728
AT4G02680.1	TraesCS4B01G058200.1	AT5G65800.1	15118728
AT4G02680.1	TraesCS4D01G058200.1	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G592500.1	Wheat	cytosol	97.78	98.99
TraesCS2D01G562900.1	Wheat	cytosol	97.55	98.76
HORVU2Hr1G119180.1	Barley	cytosol	97.0	98.2
Os11t0585900-01	Rice	cytosol	88.65	93.0
EES08750	Sorghum	cytosol	89.1	90.0
Zm00001d052974_P002	Maize	cytosol, extracellular, nucleus	85.43	84.67
Zm00001d007522_P023	Maize	cytosol	81.98	81.8
VIT_00s0179g00100.t01	Wine grape	cytosol	70.08	71.11
Solyc09g065640.2.1	Tomato	cytosol	68.52	69.53
PGSC0003DMT400049804	Potato	cytosol	67.96	68.96
Bra000868.1-P	Field mustard	cytosol	61.85	66.91
CDY66290	Canola	cytosol, plastid	61.62	66.59
KRH71376	Soybean	cytosol	65.52	66.48
CDY18003	Canola	cytosol	61.29	66.23
KRH67265	Soybean	cytosol	64.74	65.54
AT4G02680.1	Thale cress	cytosol	64.74	65.54
KRH32058	Soybean	cytosol	64.4	65.28
VIT_00s0233g00080.t01	Wine grape	cytosol	16.57	62.34
KRG95578	Soybean	cytosol	64.29	60.97
VIT_18s0089g00540.t01	Wine grape	cytosol	7.45	52.76
TraesCS4A01G111500.1	Wheat	cytosol, plastid	46.38	43.08

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0010364	InterPro:IPR000210	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00651
PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF2	InterPro:SKP1/BTB/POZ_sf
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
EnsemblPlantsGene:TraesCS2A01G591300	EnsemblPlants:TraesCS2A01G591300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:778918761..778923576

Molecular Weight (calculated)

101292.0 Da

IEP (calculated)

6.750

GRAVY (calculated)

-0.151

Length

899 amino acids

Sequence
(BLAST)

001: MRKLFFSELT SCKETKLQSA THSWLPMDKG KLSKFTGHSS SSSSSIESLM KMPEPPVLPH FKPADYVDIL AQIHEELEYC PPDEKSCLYL LQFQVFRGLG
101: EAKLSRRSLQ AAWEKASTIH EKLIFGAWLK YEKRGEEPIS DLLGSCGKCS QEFKLLDFVS QISAESHGIS YDDESDEFQG SPVVHFRIRD DMIACDRRKL
201: AALSTPLYAM LNGGFKESHL EVIDMSRNGI SPIGMRAISK FSLSGRLPYL SAESILEMLD FANKFCCKGL KDACEQKLAS FVSSRQDAID YMECAIELGC
301: SILAASCLQV LLNELPECLN DEQVVRIFSS ANKQQRSTMA GNASFSLYCL LGEVSMSISA TSDVTVSFLE KLVDSASDSR QKQLALHQLA CVRLLRKDHA
401: EAERLFNAAF TAGHVYSVVG LARLASLRSN KHYSLNLLDS VMSSRWPLGW MYQERALYLD GDSKLENLNK ATELDPTLTY PYMFRAASLM KRQSVEAALM
501: EINRILGFKL VLECLELRFC CYLALEDYRA ALCDVQAILT LAPDYRMIGG RVAAKQLRTL VMENVEQWTT ADCWMQLYDR WSSVDDIGSL SVIYQMLESD
601: AAKGVLYFRQ SLLLLRLNCP EAAMRSLQLA REHAASHHER LVYEGWILYD TGHCEEGLQK AEASIAIQRS FEAFFLKAYA LADSSLEAST SATVVSLLED
701: ALRCPSDRLR KGQALNNLGS VYVDCGNLDL AAECYINALK IGHTRAHQGL ARVHFLRNNR TGAFEEMTKL IEKARSNASA YEKRSEYCDR DLTKADLQMV
801: TKLDPLRVYP YRYRAAVLMD NHKEKDAISE LTKAIAFKAD LNLLHLRAAF HEHVGDISGA LRDCRAALSV DPNHQEMLEL HHRTGMICKR CCYRCMLFF

Best Arabidopsis Sequence Match ( AT4G02680.1 )
(BLAST)

001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP

Arabidopsis Description

EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.