Factsheet for Bra000868.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024420.1-P
Bra031846.1-P
Bra037829.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02680.1	Bra024420.1-P	AT5G65800.1	15118728
AT4G02680.1	Bra031846.1-P	AT5G65800.1	15118728
AT4G02680.1	Bra037829.1-P	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66290	Canola	cytosol, plastid	97.47	97.36
AT4G02680.1	Thale cress	cytosol	92.06	86.15
VIT_00s0179g00100.t01	Wine grape	cytosol	75.93	71.22
Solyc09g065640.2.1	Tomato	cytosol	74.49	69.86
PGSC0003DMT400049804	Potato	cytosol	74.37	69.75
KRH67265	Soybean	cytosol	71.84	67.23
GSMUA_Achr4P21140_001	Banana	cytosol	72.08	67.08
GSMUA_Achr4P28450_001	Banana	cytosol	70.64	66.33
KRH71376	Soybean	cytosol	70.04	65.69
KRH32058	Soybean	cytosol	70.04	65.61
Bra022691.1-P	Field mustard	cytosol	4.81	65.57
Os11t0585900-01	Rice	cytosol	67.27	65.23
EES08750	Sorghum	cytosol	69.55	64.94
Os07t0178100-01	Rice	cytosol	68.47	64.22
EER95939	Sorghum	cytosol	67.99	63.63
TraesCS2B01G592500.1	Wheat	cytosol	67.63	63.29
TraesCS2D01G562900.1	Wheat	cytosol	67.63	63.29
HORVU2Hr1G119180.1	Barley	cytosol	67.51	63.18
Zm00001d018939_P001	Maize	cytosol	67.15	62.84
KRG95578	Soybean	cytosol	71.36	62.55
TraesCS2A01G591300.1	Wheat	cytosol	66.91	61.85
Zm00001d052974_P002	Maize	cytosol, extracellular, nucleus	66.19	60.64
Zm00001d007522_P023	Maize	cytosol	62.58	57.71
Bra012838.1-P	Field mustard	cytosol	50.54	45.55
Bra000048.1-P	Field mustard	cytosol, plastid	51.02	45.4
Bra005123.1-P	Field mustard	plastid	49.58	45.13
Bra006875.1-P	Field mustard	cytosol	50.66	44.74
Bra002638.1-P	Field mustard	plastid	45.25	40.78

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	EnsemblPlantsGene:Bra000868	EnsemblPlants:Bra000868.1	EnsemblPlants:Bra000868.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010364	InterPro:IPR011990	InterPro:IPR019734	UniProt:M4C9I9	PANTHER:PTHR44203
PANTHER:PTHR44203:SF2	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000254059B
SEG:seg	:	:	:	:	:

Description

AT4G02680 (E=0.0) EOL1 | EOL1 (ETO1-LIKE 1); binding / protein binding

Coordinates

chrA03:+:13597887..13601140

Molecular Weight (calculated)

94466.6 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.272

Length

831 amino acids

Sequence
(BLAST)

001: MRTFYPSDSC SKESHLNSLN PQSWLQVERG KLSSSASSSA PLCRESFIKV PEPQILPHYK PLDYVEVLAQ IHEELESCSL QDRSSLYLLQ YQVFRGLGET
101: KLGQRSLRSA WQEATTVHEK VVFGSWLRYE KQGEEVIAEL LSSCGKYSEE FVPLDIASYL PVTSPEAASV KKEDASLSAP YFSVANVLIG VSKNLLIEVL
201: VFANKFCCER LKDACDRELA SLVSSMECAV ELMDFALEES SPILAASCLQ VFLYELPESL TDERVVEALT RVNRSHVSTM AGKASFSLYS CLTEVSMRLD
301: PRSDRTLSFL EKVVDFAESD RQRVLGFHRL GCTRLLRKEY REAEEAFETA FNLGHVYSAT GLARIGYIQG HKLWGYEKLT SVISSVSPPL GWMYQERSLY
401: CEGDKKLEDL EKATELDPTL TYPYMYRAVK LMSEQNAEAA LEEINRILGF KLALECLEIR FCLYLGMDDY EAALRDIQAA LTLCPDYRMF DGKVAARQLR
501: TLVYEHVESW TTADCWMQLY EKWSNVDDIG SLSVIYQMLE ADACKGVLYF RQSLLLLRLK CPEAAMRSLQ LAREHASSDH ERLVYEGWIL YDTGHCEEGL
601: QKAKESIRIK RSFEAYFLQA YALAESSLDP SSSSTVVSLL EDALKCPSDR LRKGQALNNL GSVYVDCEKL DLAADCYINA LKVRHTRAHQ GLARVHFLRN
701: DKAAAYEEMT RLIEKAQNNA SAYEKRSEYC DRELAKSDLE MVTRLDPLRV YPYRYRAAVL MDSRKEKEAI EELSRAIAFK ADLHLLHLRA AFHEHNGDVS
801: SALRDCRAAL SVDPNHQEML ELHSRVNSHE P

Best Arabidopsis Sequence Match ( AT4G02680.1 )
(BLAST)

001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP

Arabidopsis Description

EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.