Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02680.1 | KRH04373 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH28319 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH58165 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH77167 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71376 | Soybean | cytosol | 95.6 | 95.71 |
| KRH67265 | Soybean | cytosol | 83.31 | 83.22 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 78.35 | 78.44 |
| KRG95578 | Soybean | cytosol | 82.75 | 77.43 |
| Solyc09g065640.2.1 | Tomato | cytosol | 73.06 | 73.14 |
| PGSC0003DMT400049804 | Potato | cytosol | 72.94 | 73.02 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 70.69 | 70.21 |
| Bra000868.1-P | Field mustard | cytosol | 65.61 | 70.04 |
| CDY18003 | Canola | cytosol | 65.61 | 69.95 |
| CDY66290 | Canola | cytosol, plastid | 65.61 | 69.95 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 69.79 | 69.94 |
| AT4G02680.1 | Thale cress | cytosol | 69.33 | 69.26 |
| Os11t0585900-01 | Rice | cytosol | 65.16 | 67.44 |
| EES08750 | Sorghum | cytosol | 66.29 | 66.07 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 65.84 | 65.77 |
| TraesCS2B01G592500.1 | Wheat | cytosol | 65.73 | 65.65 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 65.39 | 65.32 |
| Os07t0178100-01 | Rice | cytosol | 65.05 | 65.12 |
| EER95939 | Sorghum | cytosol | 65.05 | 64.98 |
| TraesCS2A01G591300.1 | Wheat | cytosol | 65.28 | 64.4 |
| Zm00001d018939_P001 | Maize | cytosol | 64.15 | 64.08 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 64.04 | 62.62 |
| Zm00001d007522_P023 | Maize | cytosol | 60.32 | 59.38 |
| KRH65637 | Soybean | cytosol | 50.73 | 46.88 |
| KRH76003 | Soybean | cytosol | 49.94 | 46.44 |
| KRG98245 | Soybean | plastid | 48.14 | 45.82 |
| KRH30203 | Soybean | plastid | 47.8 | 45.35 |
| KRH72722 | Soybean | cytosol, plastid | 47.35 | 44.82 |
| KRH17084 | Soybean | plastid | 46.79 | 43.46 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100782033 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | EMBL:ACUP02006094 | InterPro:BTB/POZ_dom |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_10G029500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1L872 |
| InterPro:IPR000210 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EnsemblPlants:KRH32058 | ProteinID:KRH32058 |
| ProteinID:KRH32058.1 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF2 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SMART:SM00225 | SUPFAM:SSF48452 | SUPFAM:SSF54695 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000233D24F | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:2566905..2571623
Molecular Weight (calculated)
100554.0 Da
IEP (calculated)
6.199
GRAVY (calculated)
-0.168
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTFFTAESC KEAHHSALNP QSWLQVERGK LPRLSSQSSS ASIESLIKVP QSPILPFFKP VDYVEVLAQI HEELESCPPQ EQSNLFLLQY QVFKGLGDVK
101: LMRRSLRSAW QRANTVHEKI IFGAWLKYEK QGEELVAQLL TACGKCEKEF GPLDVESHIP FDKNVSSQDR ALMNGNDASE YVIFKIGDEK IVCDRQKISE
201: LSAPFHAMLK GCFRESLSET IDLSENNLSP SGMRAVSYFS LTDSLLDVPP NLLVEILAFA NKYCCEGLKQ ACDRRLASLV SSREDALELM EYAVDQNSAV
301: LAASCLQVLL RNIPKCLSDN RVVELFIHAN KQQLAVMVGP GIFSLFCFLS EVSMNLNSSS DTTAHFLERL VDFAENDKQR LLAFHQLGCV RLSRKEYDEA
401: YCLFERALNV GHIYSVAGLA RLDSIKGEKL LSYEKISSVI SSVTPLGWMY QERSLYCDGD LRRKDLEKAT ELDPTLIYPY MYRTASLMKS GNVQVALAEI
501: NRILGFKLSL ECLELRFFIY LVLEDYKAAL RDVQAILSLC PSYKMFEGRV AASQLCTLVR EHVEHWTTAD CWARLYDCWS AVDDIESLSV IYQMLESDVA
601: KGVLYFRQSL LLLRLNCPEA AMRSLQLAWQ HVSSEHERLV YEGWILYDTG HCEEGLQKAE ESISIKRSFE AYFLKAYALA DSSLDSSCSS TVISLLEDAL
701: RCPSDNLRKG QALNNLGSVY VDCGKLELAE DCYIKALKIQ HTRAHQGLAR VHFLKNDKAA AYKEMTNLIE KARNNASAYE KRSEYGDREI TKADLEMVTR
801: LDPLRVYPYR YRAAVLMDSH KEEEAIAELS RAIAFKADLH LLHLRAAFHE HKGDVLGALR DCRAALSVDP FHQKMLELHC RVNSHEP
101: LMRRSLRSAW QRANTVHEKI IFGAWLKYEK QGEELVAQLL TACGKCEKEF GPLDVESHIP FDKNVSSQDR ALMNGNDASE YVIFKIGDEK IVCDRQKISE
201: LSAPFHAMLK GCFRESLSET IDLSENNLSP SGMRAVSYFS LTDSLLDVPP NLLVEILAFA NKYCCEGLKQ ACDRRLASLV SSREDALELM EYAVDQNSAV
301: LAASCLQVLL RNIPKCLSDN RVVELFIHAN KQQLAVMVGP GIFSLFCFLS EVSMNLNSSS DTTAHFLERL VDFAENDKQR LLAFHQLGCV RLSRKEYDEA
401: YCLFERALNV GHIYSVAGLA RLDSIKGEKL LSYEKISSVI SSVTPLGWMY QERSLYCDGD LRRKDLEKAT ELDPTLIYPY MYRTASLMKS GNVQVALAEI
501: NRILGFKLSL ECLELRFFIY LVLEDYKAAL RDVQAILSLC PSYKMFEGRV AASQLCTLVR EHVEHWTTAD CWARLYDCWS AVDDIESLSV IYQMLESDVA
601: KGVLYFRQSL LLLRLNCPEA AMRSLQLAWQ HVSSEHERLV YEGWILYDTG HCEEGLQKAE ESISIKRSFE AYFLKAYALA DSSLDSSCSS TVISLLEDAL
701: RCPSDNLRKG QALNNLGSVY VDCGKLELAE DCYIKALKIQ HTRAHQGLAR VHFLKNDKAA AYKEMTNLIE KARNNASAYE KRSEYGDREI TKADLEMVTR
801: LDPLRVYPYR YRAAVLMDSH KEEEAIAELS RAIAFKADLH LLHLRAAFHE HKGDVLGALR DCRAALSVDP FHQKMLELHC RVNSHEP
001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.