CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95578
KRG98245
KRH04373
KRH09670
KRH17084
KRH27892
KRH28319
KRH30203
KRH32058
KRH41241
KRH41440
KRH49039
KRH58165
KRH59970
KRH60148
KRH67265
KRH71376
KRH72722
KRH74169
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	KRH09670	AT1G80650.1	21798944
AT2G22810.1	KRH04373	AT2G22810.1	14983000
AT2G22810.1	KRH28319	AT2G22810.1	14983000
AT2G22810.1	KRH58165	AT2G22810.1	14983000
AT2G22810.1	KRH77167	AT2G22810.1	14983000
AT2G22810.1	KRH27892	AT4G11280.1	14983000
AT2G22810.1	KRH41241	AT4G11280.1	14983000
AT2G22810.1	KRH59970	AT4G11280.1	14983000
AT2G22810.1	KRH41440	AT4G26200.1	14983000
AT2G22810.1	KRH49039	AT4G26200.1	14983000
AT2G22810.1	KRH60148	AT4G26200.1	14983000
AT2G22810.1	KRH74169	AT4G26200.1	14983000
AT2G22810.1	KRH04373	AT4G37770.1	14983000
AT2G22810.1	KRH28319	AT4G37770.1	14983000
AT2G22810.1	KRH58165	AT4G37770.1	14983000
AT2G22810.1	KRH77167	AT4G37770.1	14983000
AT4G37770.1	KRH04373	AT2G22810.1	14983000
AT4G37770.1	KRH28319	AT2G22810.1	14983000
AT4G37770.1	KRH58165	AT2G22810.1	14983000
AT4G37770.1	KRH77167	AT2G22810.1	14983000
AT4G37770.1	KRH04373	AT4G37770.1	14983000
AT4G37770.1	KRH28319	AT4G37770.1	14983000
AT4G37770.1	KRH58165	AT4G37770.1	14983000
AT4G37770.1	KRH77167	AT4G37770.1	14983000
AT5G65800.1	KRG95578	AT4G02680.1	15118728
AT5G65800.1	KRH32058	AT4G02680.1	15118728
AT5G65800.1	KRH67265	AT4G02680.1	15118728
AT5G65800.1	KRH71376	AT4G02680.1	15118728
AT5G65800.1	KRG98245	AT5G58550.1	15118728
AT5G65800.1	KRH17084	AT5G58550.1	15118728
AT5G65800.1	KRH30203	AT5G58550.1	15118728
AT5G65800.1	KRH72722	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28319	Soybean	cytosol	96.81	96.6
KRH04373	Soybean	cytosol	84.89	84.0
KRH58165	Soybean	cytosol	84.68	82.92
VIT_00s0840g00010.t01	Wine grape	cytosol	76.6	76.76
VIT_00s1437g00010.t01	Wine grape	cytosol	76.38	76.55
Solyc02g063540.1.1	Tomato	cytosol	46.17	76.41
PGSC0003DMT400055203	Potato	cytosol	74.89	75.05
Solyc02g091990.2.1	Tomato	cytosol	74.89	75.05
CDY66472	Canola	cytosol	64.26	74.94
CDX75675	Canola	cytosol	71.28	74.28
PGSC0003DMT400008587	Potato	cytosol	72.34	73.75
Solyc03g043890.2.1	Tomato	cytosol	73.62	73.46
AT3G49700.1	Thale cress	cytosol	73.4	73.4
CDY02111	Canola	cytosol	73.4	73.4
Bra017962.1-P	Field mustard	cytosol	73.4	73.4
Bra012924.1-P	Field mustard	cytosol	73.4	73.4
CDY08163	Canola	cytosol	73.19	73.19
CDY23035	Canola	cytosol	72.55	73.18
PGSC0003DMT400008605	Potato	cytosol	65.53	72.81
AT5G65800.1	Thale cress	cytosol	72.77	72.77
CDY05953	Canola	cytosol	72.55	72.55
CDX69326	Canola	cytosol	72.34	72.49
Bra011784.1-P	Field mustard	cytosol	72.34	72.49
Bra031846.1-P	Field mustard	cytosol	72.34	72.34
CDX81296	Canola	cytosol	67.45	72.21
AT4G37770.1	Thale cress	cytosol	71.91	72.07
CDY18674	Canola	cytosol	67.23	71.98
Bra030199.1-P	Field mustard	cytosol	72.34	71.73
Bra024420.1-P	Field mustard	cytosol	71.7	71.7
Bra010611.1-P	Field mustard	cytosol	71.49	71.64
Bra037829.1-P	Field mustard	cytosol	66.81	71.53
CDY25639	Canola	cytosol	72.13	71.52
CDY69462	Canola	cytosol	71.28	71.43
CDX89520	Canola	cytosol	71.7	71.1
GSMUA_Achr2P08600_001	Banana	cytosol	69.79	70.84
GSMUA_Achr5P08880_001	Banana	cytosol	69.79	70.39
GSMUA_Achr3P25830_001	Banana	mitochondrion	67.23	70.38
AT2G22810.1	Thale cress	cytosol	70.85	70.25
PGSC0003DMT400013977	Potato	cytosol	55.74	70.24
GSMUA_Achr1P14280_001	Banana	nucleus	67.87	69.8
GSMUA_Achr1P04420_001	Banana	cytosol	66.81	67.97
GSMUA_Achr4P01340_001	Banana	mitochondrion	66.6	67.75
KRH61460	Soybean	cytosol	50.21	67.43
KRH52156	Soybean	cytosol	64.68	65.1
Os03t0727600-01	Rice	cytosol	65.32	63.04
TraesCS4B01G058200.1	Wheat	cytosol	64.89	62.89
TraesCS4A01G256500.1	Wheat	cytosol	64.68	62.68
TraesCS4D01G058200.1	Wheat	cytosol	64.26	62.27
Zm00001d033862_P001	Maize	cytosol	64.04	62.06
EER90948	Sorghum	cytosol	64.47	60.97
KRH41440	Soybean	cytosol	54.89	58.64
KRH60148	Soybean	cytosol	54.04	57.73
KRH49039	Soybean	cytosol	53.83	56.73
KRH74169	Soybean	cytosol	53.19	56.05
HORVU4Hr1G009800.5	Barley	cytosol, plastid	64.26	52.89
KRH27892	Soybean	cytosol	52.55	51.46
KRH41241	Soybean	cytosol	52.98	51.45
KRH59970	Soybean	cytosol	52.34	50.83
KRH06585	Soybean	cytosol	49.79	49.37
KRH48058	Soybean	cytosol	49.57	49.16
KRH00855	Soybean	cytosol	49.57	48.54
KRH65284	Soybean	cytosol	12.55	47.97
KRH40379	Soybean	cytosol	48.51	47.01
KRH09217	Soybean	plastid	40.0	35.61
KRH38710	Soybean	plastid	40.0	35.54
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	37.23	34.93
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.38	34.06
KRH74536	Soybean	cytosol	20.43	19.96
KRH69622	Soybean	cytosol	20.21	19.75
KRH47719	Soybean	endoplasmic reticulum	20.21	17.56
KRH06285	Soybean	mitochondrion	20.0	17.54

Protein Annotations

EntrezGene:100783062	MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EMBL:ACUP02000658	InterPro:Aminotransferase_I/II
EnsemblPlantsGene:GLYMA_01G196100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	UniProt:I1J9H0	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH77167
ProteinID:KRH77167	ProteinID:KRH77167.1	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI00023371DF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:53027144..53030013

Molecular Weight (calculated)

53263.6 Da

IEP (calculated)

8.528

GRAVY (calculated)

-0.398

Length

470 amino acids

Sequence
(BLAST)

001: MRLLSTKATC NSHGQDSSYF LGWQEYEKNP FDEVLNPKGI IQMGLAENQL SFDLLESWLA KNPDVPGFKS EGKSIFRELA LFQDYHGLPS FKKALVDFMA
101: EIRGNRVTFD PNHIVLTAGS TSANETLMFC LAEKGEAFLL PTPYYPGFDR DLKWRTGVEI VPIQCTSSNN FQVTEPALQQ AYQDAKKRNL RVKGVLVTNP
201: SNPLGTTMSR GELNLLIDFI KDKDMHLISD EIYSGTVYNS PGFVSVMEIL KDRNDLDIWD RVHVVYSLSK DLGLPGFRVG AIYSENHAVV AAATKMSSFG
301: LVSSQTQYLL AAMLGDKKFT KNYISENQKR LKRRQRNLVS GLQKAGISTL KTNNAGLFCW VDMRHLLHSN TFEAEMDLWK KILYEVRLNI SPGSSCHCTE
401: PGWFRMCFAN MSEDTLNLAM NRLKTFVEES SDNGCAKKRV QSSGTSSRRK SLSNWVFRLS SRDHREQEER

Best Arabidopsis Sequence Match ( AT3G49700.1 )
(BLAST)

001: MKQLSRKVTS NAHGQDSSYF LGWEEYEKNP YDEIKNPNGI IQMGLAENQL CFDLIETWLA KNPDAAGLKK DGQSIFKELA LFQDYHGLPE FKKALAEFME
101: EIRGNRVTFD PSKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTMLTR RELNLLVDFI TSKNIHLISD EIYSGTVFGF EQFVSVMDVL KDKNLENSEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSTYLDENQ KRLKIRQKKL VSGLEAAGIT CLKSNAGLFC WVDMRHLLDT NTFEAELELW KKIVYDVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA MKRLKEYVES TDSRRVISKS SHDRIKSLRK RTVSNWVFRV SWTDRVPDER

Arabidopsis Description

ACS91-aminocyclopropane-1-carboxylate synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.