Factsheet for Bra030199.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008448.1-P
Bra010611.1-P
Bra011784.1-P
Bra019117.1-P
Bra026456.1-P
Bra030199.1-P
Bra035236.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	Bra008448.1-P	AT1G80650.1	21798944
AT2G22810.1	Bra030199.1-P	AT2G22810.1	14983000
AT2G22810.1	Bra035236.1-P	AT4G11280.1	14983000
AT2G22810.1	Bra019117.1-P	AT4G26200.1	14983000
AT2G22810.1	Bra026456.1-P	AT4G26200.1	14983000
AT2G22810.1	Bra010611.1-P	AT4G37770.1	14983000
AT2G22810.1	Bra011784.1-P	AT4G37770.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25639	Canola	cytosol	99.16	99.16
AT2G22810.1	Thale cress	cytosol	88.4	88.4
Bra011784.1-P	Field mustard	cytosol	80.59	81.45
Bra010611.1-P	Field mustard	cytosol	79.96	80.81
Solyc02g063540.1.1	Tomato	cytosol	45.99	76.76
VIT_00s1437g00010.t01	Wine grape	cytosol	75.95	76.76
VIT_00s0840g00010.t01	Wine grape	cytosol	75.95	76.76
PGSC0003DMT400008587	Potato	cytosol	73.84	75.92
PGSC0003DMT400008605	Potato	cytosol	66.88	74.94
Solyc02g091990.2.1	Tomato	cytosol	74.05	74.84
Bra031846.1-P	Field mustard	cytosol	74.05	74.68
PGSC0003DMT400055203	Potato	cytosol	73.63	74.41
Bra037829.1-P	Field mustard	cytosol	68.78	74.26
Bra017962.1-P	Field mustard	cytosol	73.63	74.26
Bra012924.1-P	Field mustard	cytosol	73.63	74.26
Bra024420.1-P	Field mustard	cytosol	73.0	73.62
KRH77167	Soybean	cytosol	71.73	72.34
KRH04373	Soybean	cytosol	72.15	72.0
Solyc03g043890.2.1	Tomato	cytosol	71.31	71.76
KRH28319	Soybean	cytosol	71.31	71.76
KRH58165	Soybean	cytosol	71.52	70.62
GSMUA_Achr2P08600_001	Banana	cytosol	68.57	70.19
GSMUA_Achr3P25830_001	Banana	mitochondrion	66.24	69.93
PGSC0003DMT400013977	Potato	cytosol	54.85	69.71
GSMUA_Achr1P14280_001	Banana	nucleus	66.67	69.15
GSMUA_Achr4P01340_001	Banana	mitochondrion	66.67	68.4
GSMUA_Achr5P08880_001	Banana	cytosol	66.24	67.38
GSMUA_Achr1P04420_001	Banana	cytosol	64.14	65.8
Bra000637.1-P	Field mustard	cytosol	63.29	64.66
Zm00001d033862_P001	Maize	cytosol	64.14	62.68
TraesCS4B01G058200.1	Wheat	cytosol	63.71	62.27
TraesCS4A01G256500.1	Wheat	cytosol	63.71	62.27
Os03t0727600-01	Rice	cytosol	63.71	62.01
TraesCS4D01G058200.1	Wheat	cytosol	63.29	61.86
EER90948	Sorghum	cytosol	64.14	61.17
Bra019117.1-P	Field mustard	cytosol	54.85	57.65
Bra026456.1-P	Field mustard	cytosol	54.22	57.37
HORVU4Hr1G009800.5	Barley	cytosol, plastid	63.29	52.54
Bra007611.1-P	Field mustard	cytosol	50.42	50.53
Bra035236.1-P	Field mustard	cytosol	51.69	50.2
Bra033261.1-P	Field mustard	cytosol	51.48	48.9
Bra022560.1-P	Field mustard	mitochondrion, plastid	39.45	37.4
Bra027008.1-P	Field mustard	cytosol	37.76	32.97
Bra016353.1-P	Field mustard	cytosol	19.62	19.46
Bra024580.1-P	Field mustard	cytosol	19.41	19.25
Bra016202.1-P	Field mustard	cytosol	19.41	19.09
Bra012371.1-P	Field mustard	cytosol	18.35	19.08
Bra025984.1-P	Field mustard	cytosol, mitochondrion	19.83	17.5
Bra016607.1-P	Field mustard	mitochondrion	19.41	16.97
Bra026675.1-P	Field mustard	mitochondrion	19.62	16.97
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.34	14.24

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra030199	EnsemblPlants:Bra030199.1
EnsemblPlants:Bra030199.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016847	GO:GO:0030170	GO:GO:0042218
GO:GO:0042802	GO:GO:0071281	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4EN29	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00025443F4	SEG:seg	:

Description

AT2G22810 (E=6e-229) ACS4, ACC4, ATACS4 | ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4); 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA04:-:10097548..10099277

Molecular Weight (calculated)

53572.9 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.316

Length

474 amino acids

Sequence
(BLAST)

001: MDLLSRKATC NSHGQDSSYF LGWEEYEKNP HDVVKNPHGI IQMGLAENQL CFDLLESWLI QNPDAASFKR DGQSIFRELA LFQDYHGLSS FKKALADFMS
101: ENRQTRVSFD SNNLVLTAGA TSANETLMFC LANPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQCTSSNG FHITKLALEE AYEQAKKLNL NVKGVLITNP
201: SNPLGTTTTQ TELNILFEFI SKNKNIHLVS DEIYSGTAFS SSEFISVMEI LKTNQLENTD VFKRVHIVYS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QRRLKNRQRM LVTGLEAIGI GCLKSNAGLF CWVDMRHLLS SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMSEETLKL ALKRLKKFVD NGTLSRSCQV GESQSLKSSR KKTTTTVSNW VFRLSFHDRD AEER

Best Arabidopsis Sequence Match ( AT2G22810.1 )
(BLAST)

001: MVQLSRKATC NSHGQVSSYF LGWEEYEKNP YDVTKNPQGI IQMGLAENQL CFDLLESWLA QNTDAACFKR DGQSVFRELA LFQDYHGLSS FKNAFADFMS
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER

Arabidopsis Description

ACS41-aminocyclopropane-1-carboxylate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q43309]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.