Factsheet for Bra025984.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26256	Canola	mitochondrion	99.07	99.07
CDY48485	Canola	plastid	98.88	98.33
Bra026675.1-P	Field mustard	mitochondrion	93.85	91.97
Bra016607.1-P	Field mustard	mitochondrion	91.62	90.77
AT1G17290.1	Thale cress	mitochondrion	89.01	88.03
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	75.42	83.16
Os07t0617800-01	Rice	mitochondrion	50.47	82.37
Zm00001d003953_P001	Maize	cytosol	13.22	79.78
VIT_09s0002g00340.t01	Wine grape	mitochondrion	77.84	79.47
GSMUA_Achr2P07320_001	Banana	cytosol	71.32	78.64
TraesCS1D01G086700.1	Wheat	cytosol	58.29	77.86
Solyc03g123600.2.1	Tomato	cytosol	69.83	77.48
Zm00001d030557_P001	Maize	cytosol, extracellular	69.09	76.97
Solyc06g063090.2.1	Tomato	extracellular	77.65	76.94
KRH06285	Soybean	mitochondrion	76.35	76.49
TraesCS1A01G085600.1	Wheat	cytosol, golgi	68.34	76.14
TraesCS1B01G102700.1	Wheat	golgi, plastid	68.34	76.14
GSMUA_Achr11P...	Banana	mitochondrion	71.69	75.79
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	68.16	75.78
GSMUA_Achr10P...	Banana	mitochondrion	73.56	75.53
KRH47719	Soybean	endoplasmic reticulum	75.98	75.42
KXG38638	Sorghum	cytosol	68.9	74.9
EER99708	Sorghum	mitochondrion	72.44	71.9
Zm00001d044135_P001	Maize	cytosol	7.45	71.43
Zm00001d022152_P001	Maize	mitochondrion	71.69	71.16
Os03t0183600-00	Rice	extracellular	62.38	68.93
TraesCS2D01G175200.1	Wheat	golgi	70.39	67.86
HORVU2Hr1G030820.1	Barley	mitochondrion	70.2	67.68
TraesCS2A01G167500.1	Wheat	mitochondrion	70.02	67.63
TraesCS2B01G193600.1	Wheat	mitochondrion	70.58	67.56
Zm00001d006875_P001	Maize	plastid	69.09	66.37
Solyc03g123610.2.1	Tomato	plastid	72.63	64.36
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	67.04	63.94
Zm00001d032984_P001	Maize	mitochondrion	31.47	51.68
Bra024580.1-P	Field mustard	cytosol	45.44	51.05
Bra016353.1-P	Field mustard	cytosol	45.44	51.05
Bra012371.1-P	Field mustard	cytosol	43.2	50.88
Bra016202.1-P	Field mustard	cytosol	44.88	50.0
Zm00001d014258_P002	Maize	cytosol	67.6	41.06
Zm00001d008277_P001	Maize	cytosol	27.93	35.21
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.67	32.27
Bra019117.1-P	Field mustard	cytosol	19.74	23.5
Bra026456.1-P	Field mustard	cytosol	19.18	22.99
Bra012924.1-P	Field mustard	cytosol	18.06	20.64
Bra024420.1-P	Field mustard	cytosol	17.88	20.43
Bra022560.1-P	Field mustard	mitochondrion, plastid	18.99	20.4
Bra011784.1-P	Field mustard	cytosol	17.69	20.26
Bra031846.1-P	Field mustard	cytosol	17.69	20.21
Bra010611.1-P	Field mustard	cytosol	17.5	20.04
Bra017962.1-P	Field mustard	cytosol	17.5	20.0
Bra030199.1-P	Field mustard	cytosol	17.5	19.83
Bra035236.1-P	Field mustard	cytosol	17.88	19.67
Bra007611.1-P	Field mustard	cytosol	17.32	19.66
Bra027008.1-P	Field mustard	cytosol	19.37	19.15
Bra037829.1-P	Field mustard	cytosol	15.46	18.91
Bra000637.1-P	Field mustard	cytosol	16.2	18.75
Bra033261.1-P	Field mustard	cytosol	16.57	17.84
Os10t0390701-00	Rice	cytosol	1.49	7.41

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra025984	EnsemblPlants:Bra025984.1
EnsemblPlants:Bra025984.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4EB25
PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000253F2F7	SEG:seg	:	:	:

Description

AT1G17290 (E=2e-266) AlaAT1 | AlaAT1 (ALANINE AMINOTRANSFERAS); ATP binding / L-alanine:2-oxoglutarate aminotransferase

Coordinates

chrA06:+:6635254..6638218

Molecular Weight (calculated)

59228.9 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.221

Length

537 amino acids

Sequence
(BLAST)

001: MRRFVIGEAK NLIDQTRRRP RPHHNNIRLL SLLASDPIPV SSSRFFSDMT GSDSSSSLPV TLDSINPNVL KCEYAVRGEI VNIAQKLQDD LKINKDAYPF
101: DEIIYCNIGN PQSLSQQPIT FFREVLALCS HTALLDRDET HALFSADSIA RAWKILDQIP GKATGAYSHS QGIKGLRDAI AAGIEARDGF PADPNDIFMT
201: DGASPGVHMM MQLLISSEKD GILCPIPQYP LYSASIALHG GSLVPYYLDE ASGWGLEISE LKKQLEDAKS KGITVRALAV INPGNPTGQV LSEENQRDIV
301: DFCKKEGLVL LADEVYQENV YVPDKKFHSF KKVARSMGYG EKDISLVSFQ SISKGYYGEC GKRGGYMEVT GFTSDVREQI YKVASVNLCS NISGQILASL
401: VMSPPKPGDE SYESYIAEKE GILSSMARRA KTLEEALNKL EGITCNRAEG AMYLFPCINL PKKAIAAAEA AKTAPDTFYC KRLLNATGIV VVPGSGFRQV
501: PGTWHFRCTI LPQEDKIPAI VNRLTEFHKS FMDEFRD

Best Arabidopsis Sequence Match ( AT1G17290.1 )
(BLAST)

001: MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN
101: KDAYPFDEII YCNIGNPQSL GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK GLRDAIADGI EARDGFPADP
201: NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE
301: NQRDVVKFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG
401: QILASLIMSP PKPGDDSYES YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA PDNFYCKRLL KATGIVVVPG
501: SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE FRD

Arabidopsis Description

ALAAT1Alanine aminotransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4I7I0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.