Factsheet for Zm00001d030557_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38638	Sorghum	cytosol	98.55	96.15
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	92.12	91.93
TraesCS1A01G085600.1	Wheat	cytosol, golgi	90.66	90.66
TraesCS1B01G102700.1	Wheat	golgi, plastid	90.46	90.46
TraesCS1D01G086700.1	Wheat	cytosol	74.27	89.05
GSMUA_Achr2P07320_001	Banana	cytosol	83.61	82.75
Zm00001d003953_P001	Maize	cytosol	14.94	80.9
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	77.18	76.39
VIT_09s0002g00340.t01	Wine grape	mitochondrion	81.95	75.1
Zm00001d044135_P001	Maize	cytosol	8.71	75.0
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	87.34	74.78
Solyc03g123600.2.1	Tomato	cytosol	74.07	73.76
Zm00001d022152_P001	Maize	mitochondrion	80.29	71.53
KRH06285	Soybean	mitochondrion	78.63	70.71
KRH47719	Soybean	endoplasmic reticulum	78.84	70.24
Bra025984.1-P	Field mustard	cytosol, mitochondrion	76.97	69.09
Solyc06g063090.2.1	Tomato	extracellular	77.39	68.82
CDY26256	Canola	mitochondrion	76.56	68.72
AT1G17290.1	Thale cress	mitochondrion	77.18	68.51
CDY48485	Canola	plastid	76.56	68.33
CDX96776	Canola	mitochondrion	76.76	68.27
Bra016607.1-P	Field mustard	mitochondrion	76.76	68.27
CDX83914	Canola	mitochondrion	76.56	68.21
CDY21752	Canola	mitochondrion	77.39	68.19
Bra026675.1-P	Field mustard	mitochondrion	77.39	68.07
CDX81815	Canola	mitochondrion	77.18	67.76
AT1G72330.3	Thale cress	mitochondrion	76.97	67.09
Zm00001d006875_P001	Maize	plastid	76.97	66.37
CDX68271	Canola	mitochondrion	17.22	64.84
Solyc03g123610.2.1	Tomato	plastid	74.48	59.24
Zm00001d020590_P009	Maize	cytosol	60.79	59.19
Zm00001d032984_P001	Maize	mitochondrion	37.14	54.74
CDY50645	Canola	cytosol	23.24	51.85
Zm00001d007937_P001	Maize	mitochondrion	51.45	51.77
Zm00001d014258_P002	Maize	cytosol	93.98	51.24
CDX83913	Canola	cytosol, nucleus, peroxisome	12.45	46.88
CDX68272	Canola	nucleus	8.3	36.04
Zm00001d008277_P001	Maize	cytosol	31.54	35.68
Zm00001d039487_P001	Maize	mitochondrion	18.46	19.26
Zm00001d033862_P001	Maize	cytosol	17.84	17.73
Zm00001d002592_P002	Maize	cytosol	17.43	17.32
Zm00001d026060_P003	Maize	cytosol	17.84	16.86
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	18.67	16.3
Os10t0390701-00	Rice	cytosol	1.45	6.48

Protein Annotations

EntrezGene:100193705	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	UniProt:A0A1D6KCZ2	InterPro:Aminotransferase_I/II
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	ProteinID:ONM01106.1
PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0001D842C1	EnsemblPlantsGene:Zm00001d030557	EnsemblPlants:Zm00001d030557_P001	EnsemblPlants:Zm00001d030557_T001	SEG:seg

Description

Alanine aminotransferase 2 mitochondrial

Coordinates

chr1:+:143971165..143976422

Molecular Weight (calculated)

52793.5 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.141

Length

482 amino acids

Sequence
(BLAST)

001: MAPSVAVENL NPKVLKCEYA VRGEIVIHAQ RLQQQLQTQP GSLPFDEILF CNIGNPQSLG QQPVTFFREV LALCDHPCLL EKEETKSLFS ADAISRAKQI
101: LATIPGRATG AYSHSQGIKG LRDAIAAGIT SRDGFPANAD DIFITDGASP GVHMMMQLLI RNEKDGILCP IPQYPLYSAS IALHGGALVP YYLDEKTGWG
201: LEISDLKKQL EDARSKGIDV RALVVINPGN PTGQVLAEDN QYDIVKFCKN EGLVLLADEV YQENIYVDNK KFNSFKKIAR SMGYGEDDLP LVSFQSVSKG
301: YYGECGKRGG YMEITGFSAP VREQIYKVAS VNLCSNITGQ ILASLVMNPP KVGDESYASY KAEKDGILQS LARRAKALED AFNTLEGFSC NKAEGAMYLF
401: PQIHLPHKAI EAAKAAKKAP DAFYALRLLE STGIVVVPGS GFGQVPGTWH VRCTILPQED KIPAVITRFK AFHEAFMAEY RD

Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)

001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN

Arabidopsis Description

ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.