Factsheet for Zm00001d039487_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d033862_P001
Zm00001d039487_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	Zm00001d033862_P001	AT2G22810.1	14983000
AT4G26200.1	Zm00001d039487_P001	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	92.21	92.01
TraesCS3A01G106600.1	Wheat	cytosol, plastid	84.2	86.06
TraesCS3D01G108700.1	Wheat	cytosol, plastid	83.98	85.84
TraesCS3B01G125200.1	Wheat	plastid	83.77	85.05
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	71.64	76.98
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	80.74	75.2
CDY72652	Canola	cytosol	31.6	72.64
KRH41440	Soybean	cytosol	66.67	70.0
GSMUA_Achr10P...	Banana	cytosol	66.02	69.32
KRH60148	Soybean	cytosol	65.58	68.86
KRH49039	Soybean	cytosol	66.23	68.61
AT4G26200.1	Thale cress	cytosol	66.23	68.46
Bra019117.1-P	Field mustard	cytosol	66.67	68.29
CDY42751	Canola	cytosol	66.67	68.29
Bra026456.1-P	Field mustard	cytosol	66.02	68.08
CDY71142	Canola	cytosol	65.8	67.86
CDX94359	Canola	cytosol	65.8	67.86
CDX89355	Canola	cytosol	65.8	67.86
KRH74169	Soybean	cytosol	65.37	67.71
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	64.72	67.19
Solyc07g026900.1.1	Tomato	cytosol	63.85	66.89
CDX92755	Canola	cytosol	60.17	66.83
GSMUA_Achr4P30870_001	Banana	cytosol	61.04	66.82
Solyc12g008740.1.1	Tomato	cytosol	62.34	66.36
Zm00001d033862_P001	Maize	cytosol	55.41	52.78
Zm00001d002592_P002	Maize	cytosol	53.03	50.52
Zm00001d026060_P003	Maize	cytosol	53.68	48.63
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	43.07	36.05
Zm00001d044135_P001	Maize	cytosol	4.33	35.71
Zm00001d003953_P001	Maize	cytosol	6.06	31.46
Zm00001d020590_P009	Maize	cytosol	20.56	19.19
Zm00001d030557_P001	Maize	cytosol, extracellular	19.26	18.46
Zm00001d007937_P001	Maize	mitochondrion	18.18	17.54
Zm00001d022152_P001	Maize	mitochondrion	19.26	16.45
Zm00001d006875_P001	Maize	plastid	19.48	16.1
Zm00001d008277_P001	Maize	cytosol	13.42	14.55
Zm00001d032984_P001	Maize	mitochondrion	9.31	13.15
Zm00001d014258_P002	Maize	cytosol	19.05	9.95

Protein Annotations

EntrezGene:107521951	MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	UniProt:A0A1D6MHP0	InterPro:Aminotransferase_I/II
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016847	GO:GO:0030170	GO:GO:0042218	GO:GO:0042802
InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	ProteinID:ONM28953.1	PFAM:PF00155	PRINTS:PR00753
ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000221CB20	EnsemblPlantsGene:Zm00001d039487	EnsemblPlants:Zm00001d039487_P001	EnsemblPlants:Zm00001d039487_T001	SEG:seg

Description

1-aminocyclopropane-1-carboxylate synthase1 1-aminocyclopropane-1-carboxylate synthase1

Coordinates

chr3:+:5625096..5627096

Molecular Weight (calculated)

49953.3 Da

IEP (calculated)

6.955

GRAVY (calculated)

-0.102

Length

462 amino acids

Sequence
(BLAST)

001: MGGKLLLGAS QSRHAHAVAS PPLSKVATSG LHGEDSPYFA GWKAYDENPY DAVSNPGGVI QMGLAENQVS FDLLEGYLRD HPEAAGWGGS GSGVASFRDN
101: ALFQDYHGLK AFRKAMANFM EKVRGGKARF DPDRIVLTAG ATAANELLTF VLANPGDALL IPTPYYPGFD RDLRWRTGVN IVPVHCDSAN GFQVTAAALQ
201: AAYEEAEAAG TRVRAVLLTN PSNPLGTTVT RPALEDVLDF VARNNIHLIS DEIYSGSVFA APDLVSVAEL VESRGDPGVA ERVHIVYSLS KDLGLPGFRV
301: GVVYSYNDAV VTAARRMSSF TLVSSQTQKT LAAMLSDAGF ADAYVRTNRQ RLRARHDHVV AGLARAGVPC LRGNAGLFVW MDMRRLLGEA TTVAGELRLW
401: DRMLREAKLN ISPGSSCHCS EPGWFRVCFA NMSLDTLDVA LARMSRFVDT WNKETTASTQ QH

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.