Factsheet for GSMUA_Achr4P30870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P04420_001
GSMUA_Achr1P14280_001
GSMUA_Achr2P08600_001
GSMUA_Achr3P25830_001
GSMUA_Achr4P01340_001
GSMUA_Achr4P30870_001
GSMUA_Achr5P08880_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	GSMUA_Achr1P04420_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr1P14280_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr2P08600_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr3P25830_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr4P01340_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr5P08880_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr10P...	AT4G26200.1	14983000
AT4G26200.1	GSMUA_Achr4P30870_001	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	77.49	74.32
KRH41440	Soybean	cytosol	73.22	70.23
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	73.7	69.89
KRH60148	Soybean	cytosol	72.04	69.09
KRH49039	Soybean	cytosol	72.75	68.83
CDY72652	Canola	cytosol	32.7	68.66
KRH74169	Soybean	cytosol	71.56	67.71
Solyc12g008740.1.1	Tomato	cytosol	67.77	65.9
Solyc07g026900.1.1	Tomato	cytosol	68.72	65.76
AT4G26200.1	Thale cress	cytosol	68.96	65.1
CDX89355	Canola	cytosol	68.48	64.51
CDX94359	Canola	cytosol	68.48	64.51
CDY71142	Canola	cytosol	68.25	64.29
Bra026456.1-P	Field mustard	cytosol	68.25	64.29
Bra019117.1-P	Field mustard	cytosol	67.3	62.97
CDY42751	Canola	cytosol	67.3	62.97
TraesCS3D01G108700.1	Wheat	cytosol, plastid	66.59	62.17
CDX92755	Canola	cytosol	61.14	62.02
TraesCS3A01G106600.1	Wheat	cytosol, plastid	66.11	61.73
TraesCS3B01G125200.1	Wheat	plastid	66.35	61.54
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.3	61.34
Zm00001d039487_P001	Maize	mitochondrion	66.82	61.04
Os05t0196600-00	Rice	cytosol	63.98	59.73
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	63.74	54.23
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	54.98	53.95
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	64.69	51.22
GSMUA_Achr3P25830_001	Banana	mitochondrion	53.79	50.56
GSMUA_AchrUn_...	Banana	cytosol	52.61	50.11
GSMUA_Achr1P04420_001	Banana	cytosol	54.5	49.78
GSMUA_Achr1P14280_001	Banana	nucleus	53.55	49.45
GSMUA_Achr5P08880_001	Banana	cytosol	54.03	48.93
GSMUA_Achr2P08600_001	Banana	cytosol	53.32	48.6
GSMUA_Achr4P29150_001	Banana	cytosol	55.92	48.56
GSMUA_Achr4P01340_001	Banana	mitochondrion	53.08	48.48
GSMUA_Achr4P24930_001	Banana	cytosol	53.55	46.99
PGSC0003DMT400092723	Potato	cytosol	9.48	34.19
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	40.76	33.92
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	39.34	33.0
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	16.35	29.87
GSMUA_Achr3P12300_001	Banana	mitochondrion	39.57	24.42
GSMUA_Achr8P15810_001	Banana	cytosol	19.91	17.46
GSMUA_Achr6P29540_001	Banana	cytosol	19.19	16.84
GSMUA_Achr11P...	Banana	mitochondrion	18.48	15.35
GSMUA_Achr2P07320_001	Banana	cytosol	17.06	14.78
GSMUA_Achr10P...	Banana	mitochondrion	17.3	13.96

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170
EnsemblPlantsGene:GSMUA_Achr4G30870_001	EnsemblPlants:GSMUA_Achr4P30870_001	EnsemblPlants:GSMUA_Achr4T30870_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0STJ9
PFAM:PF00155	PRINTS:PR00753	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002957D8C	:	:	:

Description

1-aminocyclopropane-1-carboxylate synthase 7 [Source:GMGC_GENE;Acc:GSMUA_Achr4G30870_001]

Coordinates

chr4:+:28274327..28275910

Molecular Weight (calculated)

47227.2 Da

IEP (calculated)

5.208

GRAVY (calculated)

-0.246

Length

422 amino acids

Sequence
(BLAST)

001: MVKGAESCVP LSEVATSNTH GEDSPYFAGW KAYDEDPYDA ASNPAGVIQM GLAENQVSFD LLEKYLDQHP GASGWGCGIS GFRENALFQD YHENHARLQL
101: CLQEMATFME QIREGRAKFD PERIVLTAGA TAANELLTFI LADPGDCLLI PTPYYPGFDR DLRWRTGVRI IPVHCSSSNG FQVTLQALED AYVKAEGMKI
201: RVRGLLLTNP SNPLGTAIAR HVLEEVLDFV TQKDIHLISD EIYSGSVFSS DEFVSVAEIV EARGYKDSIY SYNDRVVTTA RRMSSFTLVS SQTQRMLASM
301: LADRGFTENY LKTNRERLKN RRDFITEGLK NAGIECLPGN AGLFCWMNLA PLLEEPTREG ELRLWSLIVH EAKLNISPGS SCHCSEAGWF RVCFANMSQQ
401: TLEVAVRRIK DFMKNMKAIQ EK

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.