Factsheet for GSMUA_Achr3P12300_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	60.67	81.85
HORVU2Hr1G119710.1	Barley	mitochondrion	10.38	73.2
HORVU7Hr1G053970.1	Barley	mitochondrion	8.19	71.79
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.99	69.49
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	50.58	68.79
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	50.29	67.19
Os06t0130400-01	Rice	plasma membrane	50.0	63.1
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	50.58	62.68
TraesCS4A01G422900.1	Wheat	golgi	50.44	62.39
EER87775	Sorghum	plastid	49.42	61.12
VIT_00s1764g00010.t01	Wine grape	cytosol	30.85	60.46
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	48.54	60.14
Solyc08g079750.2.1	Tomato	plastid	47.51	59.31
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	43.42	58.93
PGSC0003DMT400010000	Potato	plastid	47.37	58.91
HORVU7Hr1G012940.1	Barley	cytosol	50.29	57.43
VIT_16s0022g02010.t01	Wine grape	cytosol	45.03	57.25
CDX91604	Canola	mitochondrion, plastid	41.52	56.8
CDY46931	Canola	mitochondrion, plastid	41.37	56.6
Bra022560.1-P	Field mustard	mitochondrion, plastid	41.37	56.6
AT5G51690.1	Thale cress	golgi, mitochondrion	40.94	56.57
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.08	55.98
KRH38710	Soybean	plastid	42.69	55.2
KRH09217	Soybean	plastid	42.4	54.92
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	40.2	54.89
Solyc03g007070.2.1	Tomato	cytosol	42.69	54.58
Bra027008.1-P	Field mustard	cytosol	40.94	51.57
CDY45965	Canola	cytosol	40.79	51.38
CDY45474	Canola	cytosol	38.6	50.48
AT1G62960.1	Thale cress	plastid	41.08	50.45
HORVU3Hr1G016440.3	Barley	cytosol	20.61	45.19
GSMUA_Achr10P...	Banana	cytosol	27.34	42.5
GSMUA_Achr3P25830_001	Banana	mitochondrion	27.78	42.32
GSMUA_Achr1P14280_001	Banana	nucleus	27.92	41.79
GSMUA_Achr1P04420_001	Banana	cytosol	28.07	41.56
GSMUA_Achr5P08880_001	Banana	cytosol	28.07	41.2
GSMUA_Achr2P08600_001	Banana	cytosol	27.63	40.82
GSMUA_Achr4P01340_001	Banana	mitochondrion	27.49	40.69
GSMUA_AchrUn_...	Banana	cytosol	25.88	39.95
GSMUA_Achr4P30870_001	Banana	cytosol	24.42	39.57
GSMUA_Achr4P29150_001	Banana	cytosol	27.92	39.3
GSMUA_Achr4P24930_001	Banana	cytosol	27.05	38.46
GSMUA_Achr8P15810_001	Banana	cytosol	13.16	18.71
GSMUA_Achr6P29540_001	Banana	cytosol	13.16	18.71
GSMUA_Achr2P07320_001	Banana	cytosol	13.01	18.28
GSMUA_Achr11P...	Banana	mitochondrion	13.16	17.72
GSMUA_Achr10P...	Banana	mitochondrion	12.43	16.25
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	27.19	10.71

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538
GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr3G12300_001	EnsemblPlants:GSMUA_Achr3P12300_001	EnsemblPlants:GSMUA_Achr3T12300_001	InterPro:IPR002130	InterPro:IPR015421
InterPro:IPR015422	InterPro:IPR029000	UniProt:M0SDZ7	PFAM:PF00155	PFAM:PF00160	PRINTS:PR00753
ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF50891	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000295EB63	SEG:seg

Description

Probable aminotransferase ACS12 [Source:GMGC_GENE;Acc:GSMUA_Achr3G12300_001]

Coordinates

chr3:-:9096959..9105359

Molecular Weight (calculated)

75569.0 Da

IEP (calculated)

8.197

GRAVY (calculated)

-0.121

Length

684 amino acids

Sequence
(BLAST)

001: MRVIVPLQAV VQGRGGLVLG SLIPCALFYF LQLYIRRDRR SSSASNLPEL APMPRSLSRS LLSPRGSSGP ARLSSRGASV ARDDDNPYYV GLKRCAEDPY
101: HHSSNPRGFM QLGLAENWLS LDMIRDWLVG NVKEPLLLDE EGELSIHGLA TYQPYDGLMD LKMAVAEFMG QVMQGSVSFH PSQIVLTAGA TPAVETLSFC
201: LADPGNAFLV PSPYYPGWDR DIKWRTGIEL IPVPCRSTDN FSISIAALEL AYNQAKKRGV KVCAVLVSNP SNPVGNLIDR ETLYDLLDFV MEKNIHLISD
301: EVFAGSTYGN DRFVSVAEVL DSENFDRRRV HIIYGLSKDL CVPGFRIGVI YSYNENVLAA ASKLARFSSI STPTQCLLIS ILSNTKFITE YLKVNKEQLC
401: DMHALFVDGL KRLGIKCASS SGGFYCWADM SMFIQSYNEK GELKLWDKLL NEAKINVTPG SSCHCIEPGW FRCCFTTLTK QDIPIPTPFS RSIRRSPTAQ
501: QKVQAAAAAS HLLYSRPIRR QPGPMSVTLH TNLGDIKCEV FCDEVPKTAE NFLALCASGY YDGTIFHRNI KGFMIQGGDP TGTGKGGTSI WGKKFNDEIR
601: ESLKHNARGI LSMANSGPNT NGSQFFLTYA KQPHLNGLYT IFGKVIHGFE VLDLMEKTQT GPGDRPLAEI RLNRVTIHAN PLAG

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.