Factsheet for TraesCS7D01G060600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	97.66	90.58
TraesCS4A01G422900.1	Wheat	golgi	96.68	89.51
HORVU2Hr1G119710.1	Barley	mitochondrion	16.41	86.6
HORVU7Hr1G053970.1	Barley	mitochondrion	12.89	84.62
HORVU7Hr1G012940.1	Barley	cytosol	97.46	83.31
Os06t0130400-01	Rice	plasma membrane	84.96	80.26
EER87775	Sorghum	plastid	84.38	78.12
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	84.18	78.08
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	8.01	69.49
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	66.99	67.65
HORVU3Hr1G016440.3	Barley	cytosol	37.11	60.9
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	58.2	59.13
VIT_00s1764g00010.t01	Wine grape	cytosol	40.04	58.74
PGSC0003DMT400010000	Potato	plastid	62.3	58.0
Solyc08g079750.2.1	Tomato	plastid	61.91	57.85
VIT_16s0022g02010.t01	Wine grape	cytosol	60.55	57.62
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	55.66	56.89
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	55.27	56.37
AT5G51690.1	Thale cress	golgi, mitochondrion	53.52	55.35
Solyc03g007070.2.1	Tomato	cytosol	57.81	55.33
CDY46931	Canola	mitochondrion, plastid	53.32	54.6
Bra022560.1-P	Field mustard	mitochondrion, plastid	53.32	54.6
CDX91604	Canola	mitochondrion, plastid	53.32	54.6
KRH09217	Soybean	plastid	55.86	54.17
KRH38710	Soybean	plastid	55.66	53.88
CDY45474	Canola	cytosol	53.32	52.2
CDY45965	Canola	cytosol	55.27	52.12
AT1G62960.1	Thale cress	plastid	56.64	52.06
Bra027008.1-P	Field mustard	cytosol	55.08	51.93
GSMUA_Achr3P12300_001	Banana	mitochondrion	67.19	50.29
TraesCS3D01G108700.1	Wheat	cytosol, plastid	39.45	44.69
TraesCS4D01G058200.1	Wheat	cytosol	38.28	40.41
TraesCS2D01G394200.1	Wheat	cytosol	35.35	37.24
TraesCS1D01G086700.1	Wheat	cytosol	16.41	20.9
TraesCS5D01G070800.1	Wheat	cytosol	18.16	19.14
TraesCS5D01G224200.1	Wheat	cytosol	16.41	17.0
TraesCS2D01G262400.2	Wheat	cytosol	16.41	16.83
TraesCS2D01G175200.1	Wheat	golgi	16.99	15.62
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	33.98	10.02

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795
PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7D01G060600	EnsemblPlants:TraesCS7D01G060600.2	TIGR:cd00609	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:33047324..33050453

Molecular Weight (calculated)

56301.8 Da

IEP (calculated)

8.384

GRAVY (calculated)

-0.080

Length

512 amino acids

Sequence
(BLAST)

001: MRIVVPLQGV VQGRGGLVLG SLIPCALFYF LQLYIKRNRP PPGSPTAASS AAPAAAGPLS PIHRSLSRGL LSPRALPALS ARGAVVRAGD EDSLYYAGLR
101: RCADDPYHPA SNPSGVIQLG LAENHLSLDL VREWMEEHAG PAMTPGGGAE ERDLTISGLA TYQPYDGILA LKMAVAGFMR QIMQESVSFD PSQMVITSGA
201: TPAMEILSFC LADPGNAFLV PSPYYPGWDR DIKWRTGIEL IPVPCRSTDN FNISITALEI AYNQAKKRGV RVRGVLISNP SNPTGSFVPK QTLRDLLDFA
301: TEKNIHLISD EVFAGSTFGS GEFVSVAELV NELEDFDRGR VHIIYGLSKD LSLAGFRVGI IYSYNESIVE AAAKIARFSS VSTPTQRLLV AMLSDQKFIS
401: NYLKVNRERL RKAYNLLVDA LKQVGIECFK SSGGFYCWAD MSKFIRSYSE KGERRLWDRL LEEAKVNVTP GSSCHCIEPG WFRCCFTTLR EQDIPVVVER
501: LRRVTDGHKS NR

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.