Factsheet for VIT_00s1764g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	9.46	55.93
HORVU2Hr1G119710.1	Barley	mitochondrion	12.61	45.36
Solyc08g079750.2.1	Tomato	plastid	69.63	44.34
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	63.61	44.22
PGSC0003DMT400010000	Potato	plastid	69.05	43.82
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	62.75	43.71
HORVU7Hr1G053970.1	Barley	mitochondrion	9.74	43.59
VIT_16s0022g02010.t01	Wine grape	cytosol	66.76	43.31
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	61.89	42.6
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	58.45	40.56
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	58.74	40.04
CDY45474	Canola	cytosol	59.31	39.58
AT1G62960.1	Thale cress	plastid	61.32	38.42
Bra027008.1-P	Field mustard	cytosol	58.74	37.75
CDY45965	Canola	cytosol	58.74	37.75
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	59.03	37.32
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	59.03	37.32
Os06t0130400-01	Rice	plasma membrane	57.88	37.27
EER87775	Sorghum	plastid	59.03	37.25
TraesCS4A01G422900.1	Wheat	golgi	58.74	37.07
HORVU7Hr1G012940.1	Barley	cytosol	58.45	34.06
VIT_15s0046g02220.t01	Wine grape	cytosol	42.12	33.56
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	42.12	33.03
VIT_18s0001g08520.t01	Wine grape	nucleus	42.12	31.48
VIT_00s0840g00010.t01	Wine grape	cytosol	41.83	31.13
VIT_00s1437g00010.t01	Wine grape	cytosol	41.83	31.13
VIT_02s0025g00360.t01	Wine grape	cytosol	42.69	30.98
GSMUA_Achr3P12300_001	Banana	mitochondrion	60.46	30.85
VIT_02s0234g00090.t01	Wine grape	cytosol	39.26	27.08
HORVU3Hr1G016440.3	Barley	cytosol	13.18	14.74
VIT_09s0002g00340.t01	Wine grape	mitochondrion	20.92	13.88
VIT_00s0225g00130.t01	Wine grape	cytosol	17.48	12.68
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	26.93	5.41

Protein Annotations

EntrezGene:100249614	wikigene:100249614	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II
ProteinID:CCB48489	ProteinID:CCB48489.1	UniProt:F6H8E6	EMBL:FN595386	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	EntrezGene:LOC100249614	wikigene:LOC100249614	PFAM:PF00155	PRINTS:PR00753	PANTHER:PTHR43795
PANTHER:PTHR43795:SF11	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002107ED4
ArrayExpress:VIT_00s1764g00010	EnsemblPlantsGene:VIT_00s1764g00010	EnsemblPlants:VIT_00s1764g00010.t01	RefSeq:XP_002281504	RefSeq:XP_002281504.2	SEG:seg

Description

No Description!

Coordinates

chrUn:+:40403636..40405042

Molecular Weight (calculated)

39594.8 Da

IEP (calculated)

8.149

GRAVY (calculated)

-0.011

Length

349 amino acids

Sequence
(BLAST)

001: PAIEILSFCL ADTGNAFLVP TPYYPSFDRD LKWRTGVEII PVPCRSADNF NLSISALDLA FDQGKKRGLK VRGIVISNPS NPVGNLLNRE TIYSLVDFAR
101: EKNIHIISNE IFAGSTHGSE EFVSMAEIID SEDLDRDRVH IVYGLSKDLC LPRFKVGVIY SSNENVLAAA KKLSRFSSIS APTQCLVISM LSDIRFIQKF
201: IQTNRERLQR MYTKFVAGLK QLGIECMRSS GGFYCWADMR GLIRSYSEKG ELELWNKLLN IAKINVTPGS SCHCIEPGWF RCCFTTLTEK DIPVVMERIR
301: KNNISFSLGF GCYSDTIKSS SHVPLQLFCF SPSYFFFFSS LRWFDQDIF

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.