Factsheet for VIT_02s0234g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	50.4	57.3
VIT_18s0001g08520.t01	Wine grape	nucleus	46.84	50.75
VIT_00s0840g00010.t01	Wine grape	cytosol	46.84	50.53
VIT_00s1437g00010.t01	Wine grape	cytosol	46.84	50.53
VIT_15s0046g02220.t01	Wine grape	cytosol	41.3	47.72
VIT_02s0025g00360.t01	Wine grape	cytosol	45.26	47.61
VIT_00s1764g00010.t01	Wine grape	cytosol	27.08	39.26
VIT_16s0022g02010.t01	Wine grape	cytosol	35.77	33.64
VIT_00s0225g00130.t01	Wine grape	cytosol	18.58	19.54
VIT_09s0002g00340.t01	Wine grape	mitochondrion	18.38	17.68
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	20.16	5.88

Protein Annotations

EntrezGene:100251690	wikigene:100251690	MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II
ProteinID:CBI25768	ProteinID:CBI25768.3	UniProt:D7T5I5	EMBL:FN595528	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	EntrezGene:LOC100251690	wikigene:LOC100251690	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753
ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI00015CE174	ArrayExpress:VIT_02s0234g00090	EnsemblPlantsGene:VIT_02s0234g00090	EnsemblPlants:VIT_02s0234g00090.t01	RefSeq:XP_002271055
RefSeq:XP_002271055.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:117104..118883

Molecular Weight (calculated)

55731.0 Da

IEP (calculated)

5.497

GRAVY (calculated)

-0.008

Length

506 amino acids

Sequence
(BLAST)

001: MARVPALTTS IQYTQHYLLE KLVVKGVVVL MGFCSLSTLA MADRHGEDSP YFAGWKAYDL NPYDLLYNPS GIIQMGLAEN QVGTDLLEEW LEKHSDIPTW
101: KGTLTSFKQT ALYQDYHGLA NFRKALANFM AEVRGRRVKI DPDMIVLTAG ATAGNEILTF CIADPGEALL VPTPYYPGFD RDLRWRTGVD IIPVKCYSYN
201: NFEVTLPALE KAYQEGLSKK QSIKAILITN PSNPLGLTIS PQTLTMILDF AAEKSIHVIS DEVYAGTVFS SQPFTSILEI VQSSNKYDPE TVHVVYSLSK
301: DLGLPGFRIG AIYSSNPRII TASRRMSSFS LISSQTQVLL KCLLSDSGFI AEYLATIKER LKRRHGEFKR GLKEIGIDSL EGNAGLFSWV NLRNLLVCDN
401: WDGEMKLWRV ILEEIGLNVS PGCSFHCEEP GWFRVCYGNM SEDEMNVALG RIKAFMSAGR AQEIAVLSMG KTDALAAAEG SSGVAAAACT SLGLDAGDLQ
501: PEPLAH

Best Arabidopsis Sequence Match ( AT2G22810.1 )
(BLAST)

001: MVQLSRKATC NSHGQVSSYF LGWEEYEKNP YDVTKNPQGI IQMGLAENQL CFDLLESWLA QNTDAACFKR DGQSVFRELA LFQDYHGLSS FKNAFADFMS
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER

Arabidopsis Description

ACS41-aminocyclopropane-1-carboxylate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q43309]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.