Factsheet for GSMUA_Achr5P13730_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 4
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	67.59	67.06
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	61.83	61.71
Solyc08g079750.2.1	Tomato	plastid	64.41	59.12
VIT_16s0022g02010.t01	Wine grape	cytosol	63.02	58.92
PGSC0003DMT400010000	Potato	plastid	64.02	58.55
Solyc03g007070.2.1	Tomato	cytosol	62.23	58.5
VIT_00s1764g00010.t01	Wine grape	cytosol	40.56	58.45
CDX91604	Canola	mitochondrion, plastid	58.05	58.4
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	58.25	58.37
Bra022560.1-P	Field mustard	mitochondrion, plastid	57.85	58.2
CDY46931	Canola	mitochondrion, plastid	57.85	58.2
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	57.65	57.88
KRH38710	Soybean	plastid	60.84	57.84
KRH09217	Soybean	plastid	60.44	57.58
AT5G51690.1	Thale cress	golgi, mitochondrion	56.46	57.37
CDY45965	Canola	cytosol	57.06	52.85
Bra027008.1-P	Field mustard	cytosol	56.86	52.67
CDY45474	Canola	cytosol	54.67	52.58
AT1G62960.1	Thale cress	plastid	57.26	51.71
GSMUA_Achr3P12300_001	Banana	mitochondrion	68.79	50.58
GSMUA_Achr10P...	Banana	cytosol	36.18	41.36
GSMUA_Achr3P25830_001	Banana	mitochondrion	36.58	40.98
GSMUA_Achr1P14280_001	Banana	nucleus	36.38	40.04
GSMUA_Achr2P08600_001	Banana	cytosol	36.78	39.96
GSMUA_Achr4P01340_001	Banana	mitochondrion	36.58	39.83
GSMUA_Achr1P04420_001	Banana	cytosol	36.38	39.61
GSMUA_Achr4P30870_001	Banana	cytosol	33.0	39.34
GSMUA_AchrUn_...	Banana	cytosol	34.19	38.83
GSMUA_Achr5P08880_001	Banana	cytosol	35.79	38.63
GSMUA_Achr4P29150_001	Banana	cytosol	35.98	37.24
GSMUA_Achr4P24930_001	Banana	cytosol	35.19	36.8
GSMUA_Achr8P15810_001	Banana	cytosol	19.48	20.37
GSMUA_Achr6P29540_001	Banana	cytosol	19.28	20.17
GSMUA_Achr2P07320_001	Banana	cytosol	18.69	19.3
GSMUA_Achr11P...	Banana	mitochondrion	19.48	19.29
GSMUA_Achr10P...	Banana	mitochondrion	17.89	17.21
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	37.77	10.94

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr5G13730_001	EnsemblPlants:GSMUA_Achr5P13730_001	EnsemblPlants:GSMUA_Achr5T13730_001	InterPro:IPR015421
InterPro:IPR015422	UniProt:M0SYA2	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
TMHMM:TMhelix	UniParc:UPI0002965388	SEG:seg	:	:	:

Description

Probable aminotransferase ACS12 [Source:GMGC_GENE;Acc:GSMUA_Achr5G13730_001]

Coordinates

chr5:+:9876405..9880334

Molecular Weight (calculated)

55409.9 Da

IEP (calculated)

8.014

GRAVY (calculated)

-0.022

Length

503 amino acids

Sequence
(BLAST)

001: MRLIVPLQGV VQGRGGLVLG TLIPCALFYF LQFYLRRNRS PPPTSPQPPA ANGPDLPGIV RSSSRNFLSA RGSSGHAAVS SRAASIARSG DSPYFVGTKK
101: CSEDPYHPVD NPDGVIQLGL AENRLSLDLI GDWLARNVTD TLLDERQGGL SISGLATYQP FDGLVELKMA VAEFMGQVMQ GSVSFDPSQI IMTAGATPAI
201: EILSFCLADA GNAFLVPSPY YPGYDRNIRW RAGIELIPVP CRSTDNFGLS IPALERAYNQ AKMRGVKVRA VLFSNPSNPV GNLLHRETLR DLLDFVTEKG
301: IHVIADEVFA GSTHGTEDFV SMAEVLNTDE FDRSRVHIVY GLSKDLSVPG FRIGLIYSFN EHVIAAASKL ARFSSVSVPT QHLLISMLND TKFITQYIKT
401: NRERLRVMYA LLVNGLKQLG VESVKSSGGF YCWTDMSKFM KSYSEKGELE LWKEMLNVAK IHLTPGTACH CIEPGWFRLC FTTLTEKDVP VVLERIKRVV
501: DNH

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.