Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46931 | Canola | mitochondrion, plastid | 91.31 | 90.4 |
| Bra022560.1-P | Field mustard | mitochondrion, plastid | 91.31 | 90.4 |
| CDX91604 | Canola | mitochondrion, plastid | 90.71 | 89.8 |
| PGSC0003DMT400079664 | Potato | golgi, mitochondrion, plastid | 63.64 | 62.5 |
| HORVU7Hr1G053970.1 | Barley | mitochondrion | 9.49 | 60.26 |
| VIT_16s0022g02010.t01 | Wine grape | cytosol | 65.25 | 60.04 |
| HORVU2Hr1G119710.1 | Barley | mitochondrion | 11.52 | 58.76 |
| HORVU3Hr1G098750.1 | Barley | cytosol, peroxisome | 6.87 | 57.63 |
| Solyc03g007070.2.1 | Tomato | cytosol | 62.22 | 57.57 |
| KRH38710 | Soybean | plastid | 61.41 | 57.47 |
| GSMUA_Achr1P18880_001 | Banana | golgi, mitochondrion | 58.18 | 56.8 |
| KRH09217 | Soybean | plastid | 60.4 | 56.63 |
| GSMUA_Achr5P13730_001 | Banana | golgi, mitochondrion | 57.37 | 56.46 |
| TraesCS7D01G060600.2 | Wheat | golgi, mitochondrion | 55.35 | 53.52 |
| Os06t0130400-01 | Rice | plasma membrane | 56.36 | 51.48 |
| EER87775 | Sorghum | plastid | 56.77 | 50.81 |
| Zm00001d045479_P001 | Maize | cytosol, peroxisome, plastid | 56.57 | 50.72 |
| TraesCS4A01G422900.1 | Wheat | golgi | 55.76 | 49.91 |
| TraesCS7A01G066400.1 | Wheat | cytosol, golgi, plastid | 55.35 | 49.64 |
| AT1G62960.1 | Thale cress | plastid | 53.13 | 47.22 |
| HORVU7Hr1G012940.1 | Barley | cytosol | 55.15 | 45.58 |
| AT4G26200.1 | Thale cress | cytosol | 37.58 | 41.61 |
| AT3G49700.1 | Thale cress | cytosol | 39.19 | 41.28 |
| GSMUA_Achr3P12300_001 | Banana | mitochondrion | 56.57 | 40.94 |
| AT4G37770.1 | Thale cress | cytosol | 38.59 | 40.72 |
| AT2G22810.1 | Thale cress | cytosol | 38.38 | 40.08 |
| AT5G65800.1 | Thale cress | cytosol | 37.58 | 39.57 |
| AT4G08040.1 | Thale cress | cytosol | 36.36 | 39.13 |
| AT1G01480.1 | Thale cress | cytosol | 35.96 | 35.89 |
| AT3G61510.1 | Thale cress | cytosol | 33.74 | 34.22 |
| AT4G11280.1 | Thale cress | cytosol | 33.94 | 33.94 |
| HORVU3Hr1G016440.3 | Barley | cytosol | 21.01 | 33.33 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 18.18 | 18.71 |
| AT1G17290.1 | Thale cress | mitochondrion | 20.2 | 18.42 |
| AT1G23310.1 | Thale cress | cytosol | 17.78 | 18.3 |
| AT1G72330.3 | Thale cress | mitochondrion | 20.2 | 18.08 |
Protein Annotations
| PDB:2GEA | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:50.4.4 | EntrezGene:835243 | Symbol:ACS12 |
| ProteinID:AED96115.1 | EMBL:AF336920 | EMBL:AK117323 | EMBL:AK220659 | ArrayExpress:AT5G51690 | EnsemblPlantsGene:AT5G51690 |
| RefSeq:AT5G51690 | TAIR:AT5G51690 | RefSeq:AT5G51690-TAIR-G | EnsemblPlants:AT5G51690.1 | TAIR:AT5G51690.1 | InterPro:Aminotransferase_I/II |
| Unigene:At.75220 | ProteinID:BAB11238.1 | EMBL:BT000463 | EMBL:BT002111 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0030170 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | RefSeq:NP_199982.2 | PFAM:PF00155 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00753 | ScanProsite:PS00105 |
| PANTHER:PTHR43795 | PANTHER:PTHR43795:SF7 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q570P9 |
| UniProt:Q8GYY0 | SUPFAM:SSF53383 | TMHMM:TMhelix | UniParc:UPI00000AC232 | SEG:seg | : |
Description
ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
Coordinates
chr5:-:20997413..21001050
Molecular Weight (calculated)
55216.9 Da
IEP (calculated)
7.353
GRAVY (calculated)
0.025
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.