Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86796 | Canola | cytosol | 90.1 | 91.39 |
| Bra035236.1-P | Field mustard | cytosol | 90.1 | 91.39 |
| CDY13251 | Canola | cytosol | 90.51 | 91.24 |
| VIT_02s0025g00360.t01 | Wine grape | cytosol | 65.86 | 67.78 |
| PGSC0003DMT400032096 | Potato | cytosol | 65.86 | 67.36 |
| Solyc08g081540.2.1 | Tomato | cytosol | 65.45 | 67.08 |
| KRH41241 | Soybean | cytosol | 65.05 | 66.53 |
| PGSC0003DMT400031769 | Potato | cytosol | 65.05 | 66.39 |
| KRH27892 | Soybean | cytosol | 64.24 | 66.25 |
| KRH59970 | Soybean | cytosol | 64.44 | 65.91 |
| Solyc08g081550.2.1 | Tomato | cytosol | 62.83 | 65.89 |
| PGSC0003DMT400014932 | Potato | cytosol | 64.24 | 65.43 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 61.41 | 62.55 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 60.61 | 62.37 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 61.01 | 62.14 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 61.01 | 62.14 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 61.01 | 62.14 |
| Zm00001d002592_P002 | Maize | cytosol | 60.2 | 61.44 |
| EES12700 | Sorghum | cytosol | 60.4 | 60.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.34 | 60.72 |
| Os04t0578000-01 | Rice | cytosol | 59.19 | 60.66 |
| AT3G61510.1 | Thale cress | cytosol | 59.39 | 60.25 |
| Solyc12g056180.1.1 | Tomato | cytosol | 57.17 | 59.83 |
| PGSC0003DMT400012864 | Potato | cytosol | 58.59 | 59.79 |
| AT1G01480.1 | Thale cress | cytosol | 59.39 | 59.27 |
| Solyc08g008100.2.1 | Tomato | nucleus | 43.23 | 58.63 |
| Zm00001d026060_P003 | Maize | cytosol | 59.6 | 57.84 |
| AT4G26200.1 | Thale cress | cytosol | 49.49 | 54.81 |
| AT4G08040.1 | Thale cress | cytosol | 49.7 | 53.48 |
| AT4G37770.1 | Thale cress | cytosol | 49.9 | 52.67 |
| AT5G65800.1 | Thale cress | cytosol | 48.48 | 51.06 |
| AT3G49700.1 | Thale cress | cytosol | 48.48 | 51.06 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 48.48 | 49.59 |
| AT2G22810.1 | Thale cress | cytosol | 47.27 | 49.37 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 33.94 | 33.94 |
| AT1G62960.1 | Thale cress | plastid | 32.93 | 29.26 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 19.39 | 19.96 |
| AT1G23310.1 | Thale cress | cytosol | 18.99 | 19.54 |
| AT1G17290.1 | Thale cress | mitochondrion | 21.01 | 19.15 |
| AT1G72330.3 | Thale cress | mitochondrion | 20.61 | 18.44 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:826730 | UniProt:A0A178UYW5 | Symbol:ACS6 |
| ProteinID:AEE82992.1 | EMBL:AF361097 | EMBL:AF428292 | ArrayExpress:AT4G11280 | EnsemblPlantsGene:AT4G11280 | RefSeq:AT4G11280 |
| TAIR:AT4G11280 | RefSeq:AT4G11280-TAIR-G | EnsemblPlants:AT4G11280.1 | TAIR:AT4G11280.1 | InterPro:Aminotransferase_I/II | Unigene:At.3654 |
| EMBL:BT000487 | ProteinID:CAB51412.1 | ProteinID:CAB81229.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0006979 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009611 | GO:GO:0009612 |
| GO:GO:0009628 | GO:GO:0009693 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009753 | GO:GO:0009835 |
| GO:GO:0009987 | GO:GO:0010087 | GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 | GO:GO:0042218 |
| GO:GO:0042802 | GO:GO:0051301 | GO:GO:0071281 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS |
| RefSeq:NP_192867.1 | ProteinID:OAO98314.1 | PFAM:PF00155 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF6 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 |
| InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q9SAR0 | SUPFAM:SSF53383 | EMBL:U73786 | EMBL:U79524 | UniParc:UPI00000AC305 |
| SEG:seg | : | : | : | : | : |
Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
Coordinates
chr4:+:6863979..6866116
Molecular Weight (calculated)
55527.4 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.271
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.