Factsheet for Os04t0578000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0727600-01
Os04t0578000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61510.1	Os04t0578000-01	AT3G61510.1	14983000
AT3G61510.1	Os04t0578000-01	AT4G11280.1	14983000
AT4G11280.1	Os03t0727600-01	AT2G22810.1	14983000
AT4G11280.1	Os04t0578000-01	AT3G61510.1	14983000
AT4G11280.1	Os04t0578000-01	AT4G11280.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G396400.1	Wheat	cytosol	82.19	81.69
TraesCS2B01G414800.1	Wheat	cytosol	82.19	81.69
TraesCS2D01G394200.1	Wheat	cytosol	81.99	81.48
Zm00001d002592_P002	Maize	cytosol	80.54	80.21
EES12700	Sorghum	cytosol	81.37	80.04
Zm00001d026060_P003	Maize	cytosol	80.33	76.08
KRH65284	Soybean	cytosol	16.15	63.41
GSMUA_Achr4P29150_001	Banana	cytosol	63.77	63.37
GSMUA_AchrUn_...	Banana	cytosol	57.35	62.53
KRH27892	Soybean	cytosol	61.7	62.08
GSMUA_Achr4P24930_001	Banana	cytosol	61.7	61.95
KRH00855	Soybean	cytosol	61.28	61.67
HORVU2Hr1G094230.2	Barley	cytosol	61.7	61.57
KRH41241	Soybean	cytosol	61.28	61.16
KRH59970	Soybean	cytosol	60.87	60.74
VIT_02s0025g00360.t01	Wine grape	cytosol	60.25	60.5
KRH06585	Soybean	cytosol	59.21	60.34
KRH48058	Soybean	cytosol	59.21	60.34
KRH40379	Soybean	cytosol	60.04	59.79
PGSC0003DMT400031769	Potato	cytosol	60.04	59.79
PGSC0003DMT400032096	Potato	cytosol	59.63	59.5
CDY11360	Canola	cytosol	58.18	59.41
Bra007611.1-P	Field mustard	cytosol	58.18	59.41
AT4G11280.1	Thale cress	cytosol	60.66	59.19
Solyc01g095080.2.1	Tomato	cytosol	59.21	58.97
Solyc08g081550.2.1	Tomato	cytosol	57.56	58.9
PGSC0003DMT400000553	Potato	cytosol	59.21	58.85
Solyc08g081540.2.1	Tomato	cytosol	58.8	58.8
VIT_15s0046g02220.t01	Wine grape	cytosol	53.21	58.68
CDY65356	Canola	cytosol	57.35	58.56
Bra035236.1-P	Field mustard	cytosol	59.01	58.4
CDX86796	Canola	cytosol	59.01	58.4
CDY13251	Canola	cytosol	59.01	58.04
AT3G61510.1	Thale cress	cytosol	58.59	57.99
PGSC0003DMT400014932	Potato	cytosol	58.18	57.82
Solyc05g050010.2.1	Tomato	cytosol	56.52	57.35
CDY15174	Canola	cytosol	58.39	56.85
CDX90035	Canola	cytosol	51.97	56.15
Bra033261.1-P	Field mustard	cytosol	57.97	56.11
AT1G01480.1	Thale cress	cytosol	57.14	55.65
Solyc12g056180.1.1	Tomato	cytosol	54.24	55.39
Os05t0196600-00	Rice	cytosol	51.55	55.09
PGSC0003DMT400012864	Potato	cytosol	55.28	55.05
PGSC0003DMT400084228	Potato	cytosol	19.88	54.86
Solyc08g008100.2.1	Tomato	nucleus	37.47	49.59
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	50.31	48.99
Os03t0727600-01	Rice	cytosol	49.28	48.87
PGSC0003DMT400055753	Potato	vacuole	38.1	48.42
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	49.48	44.84
Os06t0130400-01	Rice	plasma membrane	35.82	31.92
Os07t0617800-01	Rice	mitochondrion	12.84	18.84
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	18.22	18.14
Os03t0183600-00	Rice	extracellular	17.81	17.7
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	17.6	17.6
Os10t0390600-01	Rice	mitochondrion	17.6	17.45
Os09t0433900-01	Rice	cytosol	16.98	16.87
Os10t0390701-00	Rice	cytosol	0.41	1.85

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4336750	EMBL:AK064250	InterPro:Aminotransferase_I/II
ProteinID:BAF15551.1	ProteinID:BAS90624.1	ProteinID:CAE03249.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	GO:GO:0016847
GO:GO:0030170	GO:GO:0042218	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	EnsemblPlantsGene:Os04g0578000
EnsemblPlants:Os04t0578000-01	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF25
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q7XQ85	SUPFAM:SSF53383	UniParc:UPI00001A53F7
RefSeq:XP_015634087.1	SEG:seg	:	:	:	:

Description

ACC SYNTHASE 2ACC synthase, Ethylene biosynthesis (Os04t0578000-01)

Coordinates

chr4:-:29131883..29134682

Molecular Weight (calculated)

54342.8 Da

IEP (calculated)

7.286

GRAVY (calculated)

-0.259

Length

483 amino acids

Sequence
(BLAST)

001: MAYQGIDLLS TKAAGDDHGE NSSYFDGWKA YDTNPFDLRH NRGGVIQMGL AENQLSLDLI EEWSKNHPEA SICTPEGVSQ FKRIANFQDY HGLPEFRKAM
101: AQFMGQVRGG KATFDPDRVV MSGGATGAQE TLAFCLANPG EAFLVPTPYY PAFDRDCCWR SGIKLLPIEC HSFNDFRLTK EALVSAYDGA RRQGISVKGI
201: LITNPSNPLG TITDRDTLAM LATFATEHRV HLVCDEIYAG SVFATPEYVS IAEVIERDVP WCNRDLIHVV YSLSKDFGLP GFRVGIIYSY NDAVVAAARR
301: MSSFGLVSSQ TQYFLARMLS DEEFIGRFLQ ESKCRLVARH ERFTSGLREV GIGCLRGNAG LFSWMDLRRM LREKTAEAEL ELWRVIVHQV KLNVSPGTSF
401: HCREPGWFRV CHANMDDETM EVALGRIHDF VRQHQQRRVK AERWAANRQL RLSLPHHHHL SPAHLSSPLA LLSPQSPMVR ATS

Best Arabidopsis Sequence Match ( AT4G11280.1 )
(BLAST)

001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT

Arabidopsis Description

ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.