Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g095080.2.1 | Tomato | cytosol | 96.3 | 96.49 |
KRH00855 | Soybean | cytosol | 69.34 | 70.21 |
KRH40379 | Soybean | cytosol | 68.31 | 68.45 |
KRH48058 | Soybean | cytosol | 66.67 | 68.35 |
KRH65284 | Soybean | cytosol | 17.28 | 68.29 |
KRH06585 | Soybean | cytosol | 66.46 | 68.14 |
VIT_15s0046g02220.t01 | Wine grape | cytosol | 61.32 | 68.04 |
Bra007611.1-P | Field mustard | cytosol | 64.2 | 65.96 |
CDY11360 | Canola | cytosol | 64.2 | 65.96 |
PGSC0003DMT400032096 | Potato | cytosol | 65.64 | 65.91 |
PGSC0003DMT400031769 | Potato | cytosol | 65.64 | 65.77 |
AT3G61510.1 | Thale cress | cytosol | 65.64 | 65.37 |
CDY65356 | Canola | cytosol | 63.58 | 65.33 |
PGSC0003DMT400014932 | Potato | cytosol | 64.81 | 64.81 |
GSMUA_Achr4P24930_001 | Banana | cytosol | 63.37 | 64.03 |
PGSC0003DMT400084228 | Potato | cytosol | 23.05 | 64.0 |
GSMUA_AchrUn_... | Banana | cytosol | 57.61 | 63.21 |
GSMUA_Achr4P29150_001 | Banana | cytosol | 62.14 | 62.14 |
PGSC0003DMT400055753 | Potato | vacuole | 48.56 | 62.11 |
PGSC0003DMT400012864 | Potato | cytosol | 61.73 | 61.86 |
TraesCS2A01G396400.1 | Wheat | cytosol | 60.7 | 60.7 |
TraesCS2B01G414800.1 | Wheat | cytosol | 60.49 | 60.49 |
TraesCS2D01G394200.1 | Wheat | cytosol | 60.49 | 60.49 |
EES12700 | Sorghum | cytosol | 60.49 | 59.88 |
Zm00001d002592_P002 | Maize | cytosol | 59.67 | 59.79 |
Os04t0578000-01 | Rice | cytosol | 58.85 | 59.21 |
Zm00001d026060_P003 | Maize | cytosol | 60.29 | 57.45 |
PGSC0003DMT400000771 | Potato | cytosol | 50.0 | 55.99 |
PGSC0003DMT400092723 | Potato | cytosol | 13.37 | 55.56 |
PGSC0003DMT400043903 | Potato | cytosol | 50.21 | 55.33 |
PGSC0003DMT400008605 | Potato | cytosol | 46.09 | 52.96 |
PGSC0003DMT400008587 | Potato | cytosol | 50.0 | 52.71 |
PGSC0003DMT400055203 | Potato | cytosol | 50.82 | 52.67 |
PGSC0003DMT400013977 | Potato | cytosol | 39.09 | 50.94 |
PGSC0003DMT400012600 | Potato | cytosol | 46.91 | 48.82 |
HORVU2Hr1G094230.2 | Barley | cytosol | 47.33 | 47.52 |
PGSC0003DMT400079664 | Potato | golgi, mitochondrion, plastid | 38.68 | 37.3 |
PGSC0003DMT400010000 | Potato | plastid | 37.86 | 33.45 |
PGSC0003DMT400047918 | Potato | cytosol | 20.16 | 20.37 |
PGSC0003DMT400012549 | Potato | cytosol, mitochondrion | 19.96 | 19.92 |
PGSC0003DMT400042202 | Potato | cytosol, mitochondrion, peroxisome, plastid | 2.47 | 14.12 |
Protein Annotations
EntrezGene:102577574 | MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | ProteinID:AAC41663 | ProteinID:AAC41663.1 |
InterPro:Aminotransferase_I/II | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 | GO:GO:0042218 |
InterPro:IPR015421 | InterPro:IPR015422 | EMBL:L20634 | UniProt:M0ZGX5 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 |
EnsemblPlantsGene:PGSC0003DMG400000193 | PGSC:PGSC0003DMG400000193 | EnsemblPlants:PGSC0003DMT400000553 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI000294C8B7 |
RefSeq:XP_006339629.1 | SEG:seg | : | : | : | : |
Description
1-aminocyclopropane-1-carboxylate synthase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400000193]
Coordinates
chr1:-:72662888..72665831
Molecular Weight (calculated)
54865.7 Da
IEP (calculated)
7.431
GRAVY (calculated)
-0.285
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFEIAKTNS ILSKLATSEE HGENSPYFDG WKAYDSDPFH PLKNPNGVIQ MGLAENQLCL DLIEDWIKRN PKASICSNEG IKSFKAIANF QDYHGLPEFR
101: RAIAKFMEKT RGGRVRFDPE RVVMAGGATG ANETIIFCLA DPGDAFLVPS PYYPAFNRDL RWRTGVQLLP IHCESSNNFK ITSKAVKEAY ENAQKSNIKV
201: RGLILTNPSN PLGTTLDKDT LKSLLSFTNQ HNIHLVCDEI YAATVFDTPQ FVSIAEILDE KEMTYCNKDL VHIVYSLSKD MGLPGFRIGI VYSFNDDVVN
301: CARKMSSFGL VSTQTQYFLA AMLSDEKFVD NFLTESAIRL AKRHKHFTNG LEEVGIKCLK NNAGLFCWMD LRPLLRESTF DSEMSLWRVI INDVKLNVSP
401: GSSFECQEPG WFRVCFANMD DGTVDIALAR IRRFVRVEKS GDESSAMEKK QQWKKNNLRL SFSKRMYDES VLSPLSSPIP ASPLVR
101: RAIAKFMEKT RGGRVRFDPE RVVMAGGATG ANETIIFCLA DPGDAFLVPS PYYPAFNRDL RWRTGVQLLP IHCESSNNFK ITSKAVKEAY ENAQKSNIKV
201: RGLILTNPSN PLGTTLDKDT LKSLLSFTNQ HNIHLVCDEI YAATVFDTPQ FVSIAEILDE KEMTYCNKDL VHIVYSLSKD MGLPGFRIGI VYSFNDDVVN
301: CARKMSSFGL VSTQTQYFLA AMLSDEKFVD NFLTESAIRL AKRHKHFTNG LEEVGIKCLK NNAGLFCWMD LRPLLRESTF DSEMSLWRVI INDVKLNVSP
401: GSSFECQEPG WFRVCFANMD DGTVDIALAR IRRFVRVEKS GDESSAMEKK QQWKKNNLRL SFSKRMYDES VLSPLSSPIP ASPLVR
001: MSQGACENQL LSKLALSDKH GEASPYFHGW KAYDNNPFHP THNPQGVIQM GLAENQLCSD LIKEWIKENP QASICTAEGI DSFSDIAVFQ DYHGLKQFRQ
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
Arabidopsis Description
ACS11-aminocyclopropane-1-carboxylate synthase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06429]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.