Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11360 | Canola | cytosol | 85.04 | 87.74 |
| Bra007611.1-P | Field mustard | cytosol | 85.04 | 87.74 |
| CDY65356 | Canola | cytosol | 84.63 | 87.31 |
| PGSC0003DMT400000553 | Potato | cytosol | 65.37 | 65.64 |
| Solyc01g095080.2.1 | Tomato | cytosol | 64.75 | 65.15 |
| AT1G01480.1 | Thale cress | cytosol | 66.19 | 65.12 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 61.07 | 61.95 |
| Solyc05g050010.2.1 | Tomato | cytosol | 59.02 | 60.5 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 60.25 | 60.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.71 | 60.27 |
| AT4G11280.1 | Thale cress | cytosol | 60.25 | 59.39 |
| Os04t0578000-01 | Rice | cytosol | 57.99 | 58.59 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 58.2 | 58.44 |
| PGSC0003DMT400084228 | Potato | cytosol | 20.9 | 58.29 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 57.99 | 58.23 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 57.99 | 58.23 |
| EES12700 | Sorghum | cytosol | 58.2 | 57.84 |
| Zm00001d002592_P002 | Maize | cytosol | 57.17 | 57.53 |
| AT4G26200.1 | Thale cress | cytosol | 50.0 | 54.59 |
| Zm00001d026060_P003 | Maize | cytosol | 56.97 | 54.51 |
| AT4G37770.1 | Thale cress | cytosol | 51.23 | 53.3 |
| PGSC0003DMT400055753 | Potato | vacuole | 40.37 | 51.84 |
| AT4G08040.1 | Thale cress | cytosol | 47.95 | 50.87 |
| AT5G65800.1 | Thale cress | cytosol | 48.98 | 50.85 |
| AT3G49700.1 | Thale cress | cytosol | 48.98 | 50.85 |
| AT2G22810.1 | Thale cress | cytosol | 49.18 | 50.63 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 45.08 | 45.45 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 34.22 | 33.74 |
| AT1G62960.1 | Thale cress | plastid | 34.22 | 29.98 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 18.03 | 18.3 |
| AT1G23310.1 | Thale cress | cytosol | 18.03 | 18.3 |
| AT1G17290.1 | Thale cress | mitochondrion | 19.06 | 17.13 |
| AT1G72330.3 | Thale cress | mitochondrion | 19.06 | 16.82 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:825324 | ProteinID:AAA96006.1 | Symbol:ACS1 |
| ProteinID:AEE80216.1 | ArrayExpress:AT3G61510 | EnsemblPlantsGene:AT3G61510 | RefSeq:AT3G61510 | TAIR:AT3G61510 | RefSeq:AT3G61510-TAIR-G |
| EnsemblPlants:AT3G61510.1 | TAIR:AT3G61510.1 | EMBL:AY133715 | InterPro:Aminotransferase_I/II | ProteinID:CAB71081.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003864 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0015940 | GO:GO:0016740 | GO:GO:0030170 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | RefSeq:NP_191710.1 | PFAM:PF00155 | PO:PO:0006339 | PRINTS:PR00753 | ScanProsite:PS00105 |
| PANTHER:PTHR43795 | PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q06429 |
| SUPFAM:SSF53383 | EMBL:U26543 | UniParc:UPI00000A6526 | EMBL:Z12615 | SEG:seg | : |
Description
ACS11-aminocyclopropane-1-carboxylate synthase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06429]
Coordinates
chr3:-:22763495..22766010
Molecular Weight (calculated)
55006.1 Da
IEP (calculated)
7.481
GRAVY (calculated)
-0.205
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQGACENQL LSKLALSDKH GEASPYFHGW KAYDNNPFHP THNPQGVIQM GLAENQLCSD LIKEWIKENP QASICTAEGI DSFSDIAVFQ DYHGLKQFRQ
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.