Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69326 | Canola | cytosol | 91.9 | 91.9 |
| CDX75675 | Canola | cytosol | 88.06 | 91.57 |
| Bra011784.1-P | Field mustard | cytosol | 91.47 | 91.47 |
| Bra010611.1-P | Field mustard | cytosol | 91.47 | 91.47 |
| CDY66472 | Canola | cytosol | 78.46 | 91.32 |
| CDY69462 | Canola | cytosol | 91.26 | 91.26 |
| AT2G22810.1 | Thale cress | cytosol | 80.17 | 79.32 |
| Solyc02g063540.1.1 | Tomato | cytosol | 47.55 | 78.52 |
| AT3G49700.1 | Thale cress | cytosol | 77.4 | 77.23 |
| AT5G65800.1 | Thale cress | cytosol | 76.97 | 76.81 |
| VIT_00s0840g00010.t01 | Wine grape | cytosol | 76.76 | 76.76 |
| VIT_00s1437g00010.t01 | Wine grape | cytosol | 76.55 | 76.55 |
| PGSC0003DMT400008587 | Potato | cytosol | 75.05 | 76.36 |
| PGSC0003DMT400008605 | Potato | cytosol | 68.02 | 75.41 |
| PGSC0003DMT400055203 | Potato | cytosol | 75.05 | 75.05 |
| Solyc02g091990.2.1 | Tomato | cytosol | 75.05 | 75.05 |
| Solyc03g043890.2.1 | Tomato | cytosol | 74.41 | 74.1 |
| PGSC0003DMT400013977 | Potato | cytosol | 57.57 | 72.39 |
| KRH77167 | Soybean | cytosol | 72.07 | 71.91 |
| KRH04373 | Soybean | cytosol | 72.71 | 71.79 |
| KRH28319 | Soybean | cytosol | 72.07 | 71.76 |
| GSMUA_Achr3P25830_001 | Banana | mitochondrion | 68.66 | 71.71 |
| GSMUA_Achr2P08600_001 | Banana | cytosol | 69.94 | 70.84 |
| GSMUA_Achr1P14280_001 | Banana | nucleus | 68.87 | 70.68 |
| KRH58165 | Soybean | cytosol | 71.86 | 70.21 |
| GSMUA_Achr4P01340_001 | Banana | mitochondrion | 68.44 | 69.48 |
| GSMUA_Achr5P08880_001 | Banana | cytosol | 68.87 | 69.31 |
| GSMUA_Achr1P04420_001 | Banana | cytosol | 67.59 | 68.61 |
| AT4G08040.1 | Thale cress | cytosol | 66.31 | 67.61 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 66.31 | 64.12 |
| TraesCS4A01G256500.1 | Wheat | cytosol | 66.31 | 64.12 |
| Zm00001d033862_P001 | Maize | cytosol | 66.1 | 63.92 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 65.88 | 63.71 |
| Os03t0727600-01 | Rice | cytosol | 65.88 | 63.45 |
| EER90948 | Sorghum | cytosol | 65.46 | 61.77 |
| AT4G26200.1 | Thale cress | cytosol | 54.8 | 57.49 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 65.46 | 53.77 |
| AT3G61510.1 | Thale cress | cytosol | 53.3 | 51.23 |
| AT1G01480.1 | Thale cress | cytosol | 53.09 | 50.2 |
| AT4G11280.1 | Thale cress | cytosol | 52.67 | 49.9 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 40.72 | 38.59 |
| AT1G62960.1 | Thale cress | plastid | 39.02 | 32.85 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 19.19 | 18.71 |
| AT1G23310.1 | Thale cress | cytosol | 19.19 | 18.71 |
| AT1G17290.1 | Thale cress | mitochondrion | 21.32 | 18.42 |
| AT1G72330.3 | Thale cress | mitochondrion | 21.11 | 17.9 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:829933 | Symbol:ACS8 | ProteinID:AEE86836.1 |
| EMBL:AF334712 | EMBL:AK221491 | ArrayExpress:AT4G37770 | EnsemblPlantsGene:AT4G37770 | RefSeq:AT4G37770 | TAIR:AT4G37770 |
| RefSeq:AT4G37770-TAIR-G | EnsemblPlants:AT4G37770.1 | TAIR:AT4G37770.1 | InterPro:Aminotransferase_I/II | Unigene:At.2875 | ProteinID:CAB38925.1 |
| ProteinID:CAB80442.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009693 | GO:GO:0009835 |
| GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 | GO:GO:0042218 | GO:GO:0042802 |
| InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | RefSeq:NP_195491.1 | PFAM:PF00155 | PO:PO:0000293 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0009025 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF10 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q56Y32 | UniProt:Q9T065 | SUPFAM:SSF53383 | UniParc:UPI00000A09EF |
Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
Coordinates
chr4:+:17752079..17754157
Molecular Weight (calculated)
53373.7 Da
IEP (calculated)
8.007
GRAVY (calculated)
-0.386
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.