Factsheet for Bra010611.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010611.1-P
Bra011784.1-P
Bra030199.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37770.1	Bra030199.1-P	AT2G22810.1	14983000
AT4G37770.1	Bra010611.1-P	AT4G37770.1	14983000
AT4G37770.1	Bra011784.1-P	AT4G37770.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69462	Canola	cytosol	99.79	99.79
Bra011784.1-P	Field mustard	cytosol	94.46	94.46
AT4G37770.1	Thale cress	cytosol	91.47	91.47
Bra030199.1-P	Field mustard	cytosol	80.81	79.96
Solyc02g063540.1.1	Tomato	cytosol	47.33	78.17
Bra012924.1-P	Field mustard	cytosol	77.19	77.02
Bra031846.1-P	Field mustard	cytosol	76.76	76.6
VIT_00s0840g00010.t01	Wine grape	cytosol	76.55	76.55
VIT_00s1437g00010.t01	Wine grape	cytosol	76.55	76.55
Bra037829.1-P	Field mustard	cytosol	71.64	76.54
Bra017962.1-P	Field mustard	cytosol	76.55	76.38
PGSC0003DMT400008587	Potato	cytosol	75.05	76.36
Bra024420.1-P	Field mustard	cytosol	76.33	76.17
PGSC0003DMT400008605	Potato	cytosol	68.23	75.65
Solyc02g091990.2.1	Tomato	cytosol	74.2	74.2
PGSC0003DMT400055203	Potato	cytosol	74.2	74.2
Solyc03g043890.2.1	Tomato	cytosol	73.56	73.25
PGSC0003DMT400013977	Potato	cytosol	57.36	72.12
KRH04373	Soybean	cytosol	72.92	72.0
KRH77167	Soybean	cytosol	71.64	71.49
KRH28319	Soybean	cytosol	71.64	71.34
GSMUA_Achr1P14280_001	Banana	nucleus	69.51	71.33
GSMUA_Achr2P08600_001	Banana	cytosol	69.94	70.84
GSMUA_Achr3P25830_001	Banana	mitochondrion	67.59	70.6
KRH58165	Soybean	cytosol	72.07	70.42
GSMUA_Achr4P01340_001	Banana	mitochondrion	69.08	70.13
GSMUA_Achr5P08880_001	Banana	cytosol	69.3	69.74
GSMUA_Achr1P04420_001	Banana	cytosol	68.44	69.48
Bra000637.1-P	Field mustard	cytosol	65.88	66.59
Zm00001d033862_P001	Maize	cytosol	66.95	64.74
TraesCS4A01G256500.1	Wheat	cytosol	66.74	64.54
TraesCS4D01G058200.1	Wheat	cytosol	66.52	64.33
TraesCS4B01G058200.1	Wheat	cytosol	66.52	64.33
Os03t0727600-01	Rice	cytosol	66.74	64.27
EER90948	Sorghum	cytosol	66.52	62.78
Bra019117.1-P	Field mustard	cytosol	56.72	58.98
Bra026456.1-P	Field mustard	cytosol	56.29	58.93
HORVU4Hr1G009800.5	Barley	cytosol, plastid	65.67	53.94
Bra007611.1-P	Field mustard	cytosol	52.67	52.22
Bra033261.1-P	Field mustard	cytosol	54.16	50.9
Bra035236.1-P	Field mustard	cytosol	52.45	50.41
Bra022560.1-P	Field mustard	mitochondrion, plastid	41.58	39.0
Bra027008.1-P	Field mustard	cytosol	39.66	34.25
Bra016353.1-P	Field mustard	cytosol	19.19	18.83
Bra012371.1-P	Field mustard	cytosol	18.12	18.64
Bra024580.1-P	Field mustard	cytosol	18.98	18.62
Bra016202.1-P	Field mustard	cytosol	18.76	18.26
Bra025984.1-P	Field mustard	cytosol, mitochondrion	20.04	17.5
Bra016607.1-P	Field mustard	mitochondrion	20.04	17.34
Bra026675.1-P	Field mustard	mitochondrion	19.62	16.79
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.81	13.37

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra010611	EnsemblPlants:Bra010611.1
EnsemblPlants:Bra010611.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4D2B1	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00025463BE	SEG:seg	:

Description

AT4G37770 (E=1e-250) ACS8 | ACS8; 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA08:+:15536662..15538367

Molecular Weight (calculated)

53045.5 Da

IEP (calculated)

7.994

GRAVY (calculated)

-0.314

Length

469 amino acids

Sequence
(BLAST)

001: MGILSRKATC NTHGQDSSYF LGWEEYEKNP YDEVKNPDGI IQMGLAENQL SFDLIESWLA KNPEAANFER EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFD PKKLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQCTSANG FRITKSALEE AYKQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNRLLDFV SRKNIHLISD EIYSGTVFTS TGFISVLEVL KEKKLENTDV SKRVHIVYSL SKDLGLPGFR VGVIYSNDDI VVAAATKMSS
301: FGLISSQTQY LLSALLSDKN FTKNYLKENQ IRLKNRHDKL VSGLEAVGIE CLKSNAGLFC WVDMRHLLRS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NMSEETLKVA LIRLKMFVDG PSSTTRSQSE HQRLKTLTKM KVSNWVLRLS FQDREPEER

Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)

001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER

Arabidopsis Description

ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.