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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000771
PGSC0003DMT400008587
PGSC0003DMT400008605
PGSC0003DMT400012864
PGSC0003DMT400013977
PGSC0003DMT400014932
PGSC0003DMT400031769
PGSC0003DMT400032096
PGSC0003DMT400043903
PGSC0003DMT400049804
PGSC0003DMT400051035
PGSC0003DMT400055203

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G22810.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400012864 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400014932 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400031769 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400032096 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400000771 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400043903 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT5G65800.1 PGSC0003DMT400049804 AT4G02680.1 15118728
AT5G65800.1 PGSC0003DMT400051035 AT5G58550.1 15118728
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g043890.2.1 Tomato cytosol 97.05 76.86
PGSC0003DMT400008605 Potato cytosol 82.31 72.58
PGSC0003DMT400008587 Potato cytosol 82.04 66.38
PGSC0003DMT400055203 Potato cytosol 82.04 65.25
VIT_00s1437g00010.t01 Wine grape cytosol 76.94 61.19
VIT_00s0840g00010.t01 Wine grape cytosol 76.68 60.98
CDX75675 Canola cytosol 72.39 59.87
CDY66472 Canola cytosol 64.34 59.55
Bra011784.1-P Field mustard cytosol 73.46 58.42
CDX69326 Canola cytosol 73.19 58.21
AT4G37770.1 Thale cress cytosol 72.39 57.57
CDY69462 Canola cytosol 72.12 57.36
Bra010611.1-P Field mustard cytosol 72.12 57.36
AT5G65800.1 Thale cress cytosol 71.85 57.02
AT3G49700.1 Thale cress cytosol 71.58 56.81
CDY23035 Canola cytosol 70.78 56.65
Bra031846.1-P Field mustard cytosol 71.31 56.6
CDY02111 Canola cytosol 70.78 56.17
Bra012924.1-P Field mustard cytosol 70.78 56.17
Bra024420.1-P Field mustard cytosol 70.78 56.17
CDY18674 Canola cytosol 65.95 56.04
CDX81296 Canola cytosol 65.95 56.04
CDY08163 Canola cytosol 70.24 55.74
Bra017962.1-P Field mustard cytosol 70.24 55.74
KRH77167 Soybean cytosol 70.24 55.74
Bra037829.1-P Field mustard cytosol 65.42 55.58
CDY05953 Canola cytosol 69.97 55.53
GSMUA_Achr2P08600_001 Banana cytosol 68.9 55.51
KRH28319 Soybean cytosol 69.97 55.41
KRH58165 Soybean cytosol 71.05 55.21
GSMUA_Achr1P14280_001 Banana nucleus 67.56 55.14
GSMUA_Achr3P25830_001 Banana mitochondrion 66.22 55.01
KRH04373 Soybean cytosol 69.97 54.95
Bra030199.1-P Field mustard cytosol 69.71 54.85
CDY25639 Canola cytosol 69.17 54.43
CDX89520 Canola cytosol 68.63 54.01
GSMUA_Achr5P08880_001 Banana cytosol 67.02 53.65
AT2G22810.1 Thale cress cytosol 68.1 53.59
GSMUA_Achr4P01340_001 Banana mitochondrion 65.15 52.6
GSMUA_Achr1P04420_001 Banana cytosol 64.61 52.16
PGSC0003DMT400012600 Potato cytosol 63.27 50.54
PGSC0003DMT400084228 Potato cytosol 23.32 49.71
TraesCS4B01G058200.1 Wheat cytosol 63.0 48.45
Os03t0727600-01 Rice cytosol 62.47 47.84
TraesCS4D01G058200.1 Wheat cytosol 62.2 47.84
TraesCS4A01G256500.1 Wheat cytosol 62.2 47.84
Zm00001d033862_P001 Maize cytosol 61.13 47.01
EER90948 Sorghum cytosol 60.59 45.47
PGSC0003DMT400000771 Potato cytosol 52.28 44.93
PGSC0003DMT400043903 Potato cytosol 53.08 44.9
HORVU4Hr1G009800.5 Barley cytosol, plastid 62.2 40.63
PGSC0003DMT400000553 Potato cytosol 50.94 39.09
PGSC0003DMT400012864 Potato cytosol 50.13 38.56
PGSC0003DMT400031769 Potato cytosol 49.33 37.94
PGSC0003DMT400032096 Potato cytosol 49.06 37.81
PGSC0003DMT400014932 Potato cytosol 48.53 37.24
PGSC0003DMT400092723 Potato cytosol 10.99 35.04
PGSC0003DMT400055753 Potato vacuole 35.12 34.47
PGSC0003DMT400079664 Potato golgi, mitochondrion, plastid 41.02 30.36
PGSC0003DMT400010000 Potato plastid 41.02 27.82
PGSC0003DMT400012549 Potato cytosol, mitochondrion 22.79 17.45
PGSC0003DMT400047918 Potato cytosol 19.3 14.97
PGSC0003DMT400042202 Potato cytosol, mitochondrion, peroxisome, plastid 2.95 12.94
Protein Annotations
MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170InterPro:IPR015421
InterPro:IPR015422UniProt:M1A3K6InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155EnsemblPlantsGene:PGSC0003DMG400005479PGSC:PGSC0003DMG400005479
EnsemblPlants:PGSC0003DMT400013977PRINTS:PR00753ScanProsite:PS00105PANTHER:PTHR43795PANTHER:PTHR43795:SF10InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI000295E15ASEG:seg:
Description
1-aminocyclopropane-1-carboxylate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400005479]
Coordinates
chr3:+:6477043..6478285
Molecular Weight (calculated)
41933.5 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.172
Length
373 amino acids
Sequence
(BLAST)
001: MSEIRGNKVT FNPNKLVLTA GATSANETLM FCLANPGDAF LLPTPYYPGF DRDLKWRTGA EIVPIQCTSS NGFRITQSAL EESYKLAKTR NLRVKGVLVT
101: NPSNPLGTAL TRNELELLVS FVAEKGIHLI SDEIYSGTVF NSPKFVSVME VLIENNYMYT EVWDRVHIVY SLSKDLGLPG FRIGAIYTND EVIVSAATKM
201: SSFGLISSQT QYLLSAMLAD KKFTKKYISE NQKRLKKRHA MLVKGLESTG ISCLESNAGL FCWVDMRHLL KTNTFEAEIE LWKKIVYEVK LNISPGSSCH
301: CTEPGWFRAC FANMSEDTLN LAIQRIKIFV DSSDVIGTNI DQSNQTNQNT STSLKKKLFA KWGFRLSFND RER
Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Arabidopsis Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.