Factsheet for PGSC0003DMT400012549

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 14983062

msms PMID: 14983062 doi

Y Balmer, WH Vensel, CK Tanaka, WJ Hurkman, E Gelhaye, N Rouhier, JP Jacquot, W Manieri, P Schürmann, M Droux, BB Buchanan

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g063090.2.1	Tomato	extracellular	96.92	87.08
Os07t0617800-01	Rice	mitochondrion	55.24	81.76
VIT_09s0002g00340.t01	Wine grape	mitochondrion	85.42	79.09
Zm00001d003953_P001	Maize	cytosol	14.17	77.53
GSMUA_Achr2P07320_001	Banana	cytosol	77.41	77.41
Zm00001d030557_P001	Maize	cytosol, extracellular	76.39	77.18
TraesCS1A01G085600.1	Wheat	cytosol, golgi	75.98	76.76
TraesCS1B01G102700.1	Wheat	golgi, plastid	75.98	76.76
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	75.77	76.4
TraesCS1D01G086700.1	Wheat	cytosol	62.83	76.12
KRH06285	Soybean	mitochondrion	83.57	75.93
Bra025984.1-P	Field mustard	cytosol, mitochondrion	83.16	75.42
KRH47719	Soybean	endoplasmic reticulum	83.57	75.23
KXG38638	Sorghum	cytosol	76.18	75.1
CDY26256	Canola	mitochondrion	82.75	75.05
GSMUA_Achr11P...	Banana	mitochondrion	78.23	75.0
CDY48485	Canola	plastid	82.75	74.63
CDX83914	Canola	mitochondrion	82.75	74.49
CDY21752	Canola	mitochondrion	83.37	74.22
GSMUA_Achr10P...	Banana	mitochondrion	79.47	74.0
CDX96776	Canola	mitochondrion	82.34	73.99
Bra026675.1-P	Field mustard	mitochondrion	83.16	73.91
Bra016607.1-P	Field mustard	mitochondrion	82.14	73.8
CDX81815	Canola	mitochondrion	83.16	73.77
AT1G17290.1	Thale cress	mitochondrion	81.72	73.3
AT1G72330.3	Thale cress	mitochondrion	81.52	71.79
EER99708	Sorghum	mitochondrion	79.06	71.16
Zm00001d022152_P001	Maize	mitochondrion	78.23	70.43
Zm00001d044135_P001	Maize	cytosol	8.01	69.64
Os03t0183600-00	Rice	extracellular	68.38	68.52
TraesCS2D01G175200.1	Wheat	golgi	76.59	66.97
TraesCS2A01G167500.1	Wheat	mitochondrion	76.39	66.91
HORVU2Hr1G030820.1	Barley	mitochondrion	76.18	66.61
TraesCS2B01G193600.1	Wheat	mitochondrion	76.59	66.49
Zm00001d006875_P001	Maize	plastid	74.54	64.94
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	73.31	63.41
Zm00001d032984_P001	Maize	mitochondrion	34.91	51.99
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	8.83	50.59
PGSC0003DMT400047918	Potato	cytosol	48.67	49.27
Zm00001d014258_P002	Maize	cytosol	76.18	41.97
Zm00001d008277_P001	Maize	cytosol	30.6	34.98
PGSC0003DMT400043903	Potato	cytosol	21.36	23.58
PGSC0003DMT400013977	Potato	cytosol	17.45	22.79
PGSC0003DMT400000771	Potato	cytosol	20.12	22.58
PGSC0003DMT400008587	Potato	cytosol	20.53	21.69
PGSC0003DMT400055203	Potato	cytosol	20.74	21.54
PGSC0003DMT400008605	Potato	cytosol	18.69	21.51
PGSC0003DMT400032096	Potato	cytosol	20.53	20.66
PGSC0003DMT400031769	Potato	cytosol	20.12	20.21
PGSC0003DMT400000553	Potato	cytosol	19.92	19.96
PGSC0003DMT400012600	Potato	cytosol	19.1	19.91
PGSC0003DMT400055753	Potato	vacuole	15.2	19.47
PGSC0003DMT400084228	Potato	cytosol	6.98	19.43
PGSC0003DMT400014932	Potato	cytosol	19.3	19.34
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	19.71	19.05
PGSC0003DMT400012864	Potato	cytosol	18.89	18.97
PGSC0003DMT400010000	Potato	plastid	18.89	16.73
PGSC0003DMT400092723	Potato	cytosol	3.08	12.82
Os10t0390701-00	Rice	cytosol	1.85	8.33

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	InterPro:Aminotransferase_I/II	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	UniProt:M1A1E3	PFAM:PF00155	EnsemblPlantsGene:PGSC0003DMG400004899	PGSC:PGSC0003DMG400004899
EnsemblPlants:PGSC0003DMT400012549	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000295CD18	SEG:seg	:	:	:

Description

Alanine aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400004899]

Coordinates

chr6:+:48346462..48351124

Molecular Weight (calculated)

53466.0 Da

IEP (calculated)

5.355

GRAVY (calculated)

-0.183

Length

487 amino acids

Sequence
(BLAST)

001: MASDYSATPI TMDNINPKVL KCEYAVRGEI VSIAQTLQQN LKDNPGSHPF DEILYCNIGN PQSLAQQPVT FFREVLALCD HPSILDKSET QGLFSADAIE
101: RAFQILEQIP GRATGAYSHS QGIKGLRDTI ASGMEARDGF PADPNDLFLT DGASPAVHMM MQLLIRSEND GILCPIPQYP LYSASIALHG GTLVPYYLDE
201: QTGWGLEISE LEHQLKTAKS KGIDVRALVV INPGNPTGQV LGEANQREIV EFCKKEGLVL LADEVYQENV YVPDKKFHSF KKISRSMGYG ETDISLVSFQ
301: SVSKGFYGEC GKRGGYMEVT GFSPAVREQI YKLASVNLCS NISGQILASL IMSPPKVGDE SYESFSAEKE AILSSLARRA KTLEEALNSL EGVTCNRAEG
401: AMYLFPCINL PDKAIKAAEE AKTAPDTFYA KHLLNATGIV VVPGSGFRQV PGTWHFRCTI LPQEEKIPAI VSRLTEFHKK FMNEFRG

Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)

001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN

Arabidopsis Description

ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.