CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

nucleus: 21132161
mitochondrion: 27780359

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47719	Soybean	endoplasmic reticulum	97.2	96.3
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	75.93	83.57
Os07t0617800-01	Rice	mitochondrion	50.37	82.07
VIT_09s0002g00340.t01	Wine grape	mitochondrion	79.1	80.61
GSMUA_Achr2P07320_001	Banana	cytosol	72.76	80.08
Zm00001d003953_P001	Maize	cytosol	13.06	78.65
Zm00001d030557_P001	Maize	cytosol, extracellular	70.71	78.63
Solyc03g123600.2.1	Tomato	cytosol	70.34	77.89
TraesCS1D01G086700.1	Wheat	cytosol	58.4	77.86
GSMUA_Achr11P...	Banana	mitochondrion	73.69	77.76
TraesCS1B01G102700.1	Wheat	golgi, plastid	69.78	77.59
TraesCS1A01G085600.1	Wheat	cytosol, golgi	69.78	77.59
Solyc06g063090.2.1	Tomato	extracellular	78.17	77.31
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	69.59	77.23
KXG38638	Sorghum	cytosol	70.9	76.92
Bra025984.1-P	Field mustard	cytosol, mitochondrion	76.49	76.35
GSMUA_Achr10P...	Banana	mitochondrion	74.44	76.29
CDY48485	Canola	plastid	76.68	76.11
CDY26256	Canola	mitochondrion	76.12	75.98
CDY21752	Canola	mitochondrion	77.05	75.5
CDX83914	Canola	mitochondrion	75.93	75.23
CDX81815	Canola	mitochondrion	77.05	75.23
Bra026675.1-P	Field mustard	mitochondrion	76.87	75.18
Zm00001d044135_P001	Maize	cytosol	7.84	75.0
AT1G17290.1	Thale cress	mitochondrion	75.93	74.95
CDX96776	Canola	mitochondrion	75.19	74.35
Bra016607.1-P	Field mustard	mitochondrion	75.0	74.17
AT1G72330.3	Thale cress	mitochondrion	76.31	73.96
EER99708	Sorghum	mitochondrion	74.07	73.38
Zm00001d022152_P001	Maize	mitochondrion	73.51	72.83
Os03t0183600-00	Rice	extracellular	63.25	69.75
TraesCS2A01G167500.1	Wheat	mitochondrion	71.08	68.53
TraesCS2D01G175200.1	Wheat	golgi	71.08	68.4
TraesCS2B01G193600.1	Wheat	mitochondrion	71.08	67.91
HORVU2Hr1G030820.1	Barley	mitochondrion	70.34	67.68
Zm00001d006875_P001	Maize	plastid	69.03	66.19
Solyc03g123610.2.1	Tomato	plastid	74.81	66.17
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	67.91	64.65
Zm00001d032984_P001	Maize	mitochondrion	31.34	51.38
KRH74536	Soybean	cytosol	44.03	49.06
KRH69622	Soybean	cytosol	43.66	48.65
Zm00001d014258_P002	Maize	cytosol	70.15	42.53
Zm00001d008277_P001	Maize	cytosol	27.43	34.51
KRH61460	Soybean	cytosol	13.62	20.86
KRH41440	Soybean	cytosol	16.98	20.68
KRH60148	Soybean	cytosol	16.79	20.45
KRH04373	Soybean	cytosol	18.1	20.42
KRH00855	Soybean	cytosol	18.28	20.42
KRH58165	Soybean	cytosol	18.28	20.42
KRH49039	Soybean	cytosol	16.98	20.4
KRH41241	Soybean	cytosol	18.28	20.25
KRH77167	Soybean	cytosol	17.54	20.0
KRH28319	Soybean	cytosol	17.54	19.96
KRH74169	Soybean	cytosol	16.6	19.96
KRH59970	Soybean	cytosol	17.91	19.83
KRH40379	Soybean	cytosol	17.91	19.79
KRH27892	Soybean	cytosol	17.54	19.58
KRH65284	Soybean	cytosol	4.48	19.51
KRH48058	Soybean	cytosol	17.16	19.41
KRH52156	Soybean	cytosol	16.6	19.06
KRH06585	Soybean	cytosol	16.79	18.99
KRH09217	Soybean	plastid	17.35	17.61
KRH38710	Soybean	plastid	17.35	17.58
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	16.04	17.17
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	15.3	16.33
Os10t0390701-00	Rice	cytosol	1.68	8.33

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	EMBL:ACUP02009822	InterPro:Aminotransferase_I/II	ncoils:Coil
EnsemblPlantsGene:GLYMA_16G013900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	UniProt:I1MK72	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH06285
ProteinID:KRH06285	ProteinID:KRH06285.1	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00023D6E32	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:-:1208577..1214194

Molecular Weight (calculated)

59442.8 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.301

Length

536 amino acids

Sequence
(BLAST)

001: MRKSAADRFR HLFNRSLILL RHRHHHHPFP SSSSLSPFSR SRFFSSTPFS MASDSPFPVT AQNINPKVLK CEYAVRGEVV TLAQNLQKDL QANPGSHPFD
101: EILYCNIGNP QSLGQQPITF FREVLALCDH PAILDKSETQ GLFSTDAIQR AWQIVDQIPG RATGAYSHSQ GVKGLRDTIA AGIEERDGFP ANPDDIFMTD
201: GASPAVHNMM QLLIRSENDG ILCPIPQYPL YSASIDLHGG FLVPYYLDEA TGWGLEIPEL KKQLEAAKSK GINVRALVVI NPGNPTGQVL GEENQRDIVE
301: FCKQEGLVLL ADEVYQENVY VPEKKFHSFK KVSRSMGYGE NDITLVSFQS VSKGYHGECG KRGGYMEVTG FSAEVREQIY KVASVNLCSN ISGQILASLV
401: MSPPKVGDES YESFNAEKEN ILESLARRAK TLEDAFNKLE GVTCNKAEGA MYLFPQIRLS QKAIKAAGDA NTAPDNFYCK RLLNATGVVV VPGSGFGQVP
501: GTWHFRCTIL PPEEKIPAIV TRLTEFHEKF MDEFRD

Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)

001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN

Arabidopsis Description

ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.