CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69622	Soybean	cytosol	98.13	98.13
VIT_00s0225g00130.t01	Wine grape	cytosol	87.53	87.53
CDY61225	Canola	peroxisome	86.9	86.9
AT1G70580.1	Thale cress	cytosol, nucleus, peroxisome	86.69	86.69
Bra016202.1-P	Field mustard	cytosol	86.69	86.51
CDY25781	Canola	cytosol	10.39	86.21
GSMUA_Achr6P29540_001	Banana	cytosol	86.07	86.07
CDY66294	Canola	cytosol	86.07	86.07
AT1G23310.1	Thale cress	cytosol	85.45	85.45
Bra016353.1-P	Field mustard	cytosol	84.82	85.36
CDY44130	Canola	cytosol	84.82	85.36
CDY41452	Canola	peroxisome	84.82	85.36
CDY04729	Canola	cytosol	84.82	85.36
Bra024580.1-P	Field mustard	cytosol	84.82	85.36
Bra012371.1-P	Field mustard	cytosol	80.25	84.65
CDY25780	Canola	peroxisome	70.89	84.62
CDX91708	Canola	peroxisome	70.89	84.62
PGSC0003DMT400047918	Potato	cytosol	84.62	84.62
GSMUA_Achr8P15810_001	Banana	cytosol	84.62	84.62
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	84.2	84.2
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	14.76	83.53
TraesCS2B01G280600.1	Wheat	plastid	82.95	83.3
TraesCS2A01G261600.1	Wheat	peroxisome	82.95	83.3
Solyc01g007940.2.1	Tomato	cytosol	81.91	83.3
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.66	83.21
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.66	83.21
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.66	83.21
KXG34265	Sorghum	cytosol	82.33	82.85
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	82.95	82.27
Zm00001d007937_P001	Maize	mitochondrion	80.25	80.58
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	79.83	79.01
TraesCS2D01G262400.2	Wheat	cytosol	76.92	74.15
CDY12474	Canola	peroxisome, plastid	81.5	73.0
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.38	50.87
KRH06285	Soybean	mitochondrion	49.06	44.03
KRH47719	Soybean	endoplasmic reticulum	49.48	43.99
CDX86161	Canola	cytosol	6.24	22.73
KRH65284	Soybean	cytosol	5.61	21.95
KRH41241	Soybean	cytosol	21.41	21.28
KRH27892	Soybean	cytosol	21.21	21.25
KRH00855	Soybean	cytosol	21.0	21.04
KRH59970	Soybean	cytosol	20.79	20.66
KRH40379	Soybean	cytosol	20.79	20.62
KRH77167	Soybean	cytosol	19.96	20.43
KRH61460	Soybean	cytosol	14.76	20.29
KRH49039	Soybean	cytosol	18.71	20.18
KRH28319	Soybean	cytosol	19.75	20.17
KRH04373	Soybean	cytosol	19.75	20.0
KRH60148	Soybean	cytosol	18.3	20.0
KRH74169	Soybean	cytosol	18.5	19.96
KRH58165	Soybean	cytosol	19.75	19.79
KRH41440	Soybean	cytosol	18.09	19.77
KRH52156	Soybean	cytosol	18.5	19.06
KRH48058	Soybean	cytosol	17.88	18.14
KRH06585	Soybean	cytosol	17.67	17.93
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	16.84	16.17
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	16.84	16.14
KRH09217	Soybean	plastid	17.46	15.91
KRH38710	Soybean	plastid	17.46	15.88

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EMBL:ACUP02000044	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:GLYMA_01G026700
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0030170	UniProt:I1J547	InterPro:IPR015421	InterPro:IPR015422	ProteinID:KRH74534.1	ProteinID:KRH74535.1
EnsemblPlants:KRH74536	ProteinID:KRH74536	ProteinID:KRH74536.1	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF373
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00023BAF65	:

Description

hypothetical protein

Coordinates

chr1:-:2800909..2808407

Molecular Weight (calculated)

53526.3 Da

IEP (calculated)

5.384

GRAVY (calculated)

-0.231

Length

481 amino acids

Sequence
(BLAST)

001: MPPKPLDYGS INENVKKSQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLSFPR QVVALCQAPF LLDDPNVGLL FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI LRRDGYPTDP ELIYLTDGAS KGVMQILNTI IRGQDDGILV PVPQYPLYSA TIALLGGTLV PYYLEETANW GLDVNELRQS
201: VEQARFKGIT VKAMVIINPG NPTGQCLSEA NLREVLQFCY QENLALLGDE VYQTNIYQDE RPFISSRKVL MDLGPPISKE VQLISFHSVS KGYYGECGQR
301: GGYFEMTNIP PETVDEIYKV ASISLSPNVP AQIFMGVMLH PPQPGDISYD KFVRESTGIL ESLRRRARLM TDGFNSCRNV VCNFTEGAMY SFPQIRLPPR
401: ALEAAKQAAK VPDVFYCLKL LEATGISTVP GSGFGQREGV FHLRTTILPD EEDMPAIMDS FKKFNDEFME QYEDNRGYSR L

Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Arabidopsis Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.