Factsheet for Os07t0108300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, nucleus

Predictor Summary:

cytosol 3
peroxisome 4
plastid 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
extracellular: 23159799
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G280600.1	Wheat	plastid	90.1	91.23
TraesCS2A01G261600.1	Wheat	peroxisome	90.1	91.23
KXG34265	Sorghum	cytosol	89.69	91.0
Zm00001d007937_P001	Maize	mitochondrion	88.87	89.98
GSMUA_Achr6P29540_001	Banana	cytosol	88.45	89.19
VIT_00s0225g00130.t01	Wine grape	cytosol	87.63	88.36
GSMUA_Achr8P15810_001	Banana	cytosol	87.01	87.73
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	86.6	86.42
CDY25781	Canola	cytosol	10.31	86.21
PGSC0003DMT400047918	Potato	cytosol	84.74	85.45
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	84.33	85.03
CDY61225	Canola	peroxisome	84.12	84.82
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	14.85	84.71
Bra016202.1-P	Field mustard	cytosol	84.12	84.65
AT1G70580.1	Thale cress	cytosol, nucleus, peroxisome	83.71	84.41
CDY41452	Canola	peroxisome	83.09	84.31
CDY44130	Canola	cytosol	83.09	84.31
Bra016353.1-P	Field mustard	cytosol	83.09	84.31
Bra024580.1-P	Field mustard	cytosol	83.09	84.31
CDY04729	Canola	cytosol	83.09	84.31
AT1G23310.1	Thale cress	cytosol	83.51	84.2
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.68	83.97
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.68	83.97
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.68	83.97
CDY66294	Canola	cytosol	83.09	83.78
KRH69622	Soybean	cytosol	82.27	82.95
KRH74536	Soybean	cytosol	82.27	82.95
Bra012371.1-P	Field mustard	cytosol	77.94	82.89
Solyc01g007940.2.1	Tomato	cytosol	80.82	82.88
CDX91708	Canola	peroxisome	68.66	82.63
CDY25780	Canola	peroxisome	68.45	82.38
TraesCS2D01G262400.2	Wheat	cytosol	84.54	82.16
CDY12474	Canola	peroxisome, plastid	78.76	71.14
Os07t0617800-01	Rice	mitochondrion	37.73	55.62
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	52.78	53.0
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.7	51.74
Os03t0183600-00	Rice	extracellular	50.1	50.0
Os10t0390600-01	Rice	mitochondrion	44.95	44.76
Os09t0433900-01	Rice	cytosol	44.54	44.44
CDX86161	Canola	cytosol	6.39	23.48
Os05t0196600-00	Rice	cytosol	17.11	18.36
Os04t0578000-01	Rice	cytosol	18.14	18.22
Os03t0727600-01	Rice	cytosol	17.32	17.25
Os06t0130400-01	Rice	plasma membrane	19.18	17.16
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	17.53	17.14
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	17.32	15.76
Os10t0390701-00	Rice	cytosol	0.62	2.78

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4342210	EMBL:AK067732	InterPro:Aminotransferase_I/II
ProteinID:BAD30627.1	ProteinID:BAF20630.1	ProteinID:BAS99731.1	ProteinID:BAS99732.1	ProteinID:EAZ38438.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlantsGene:Os07g0108300	EnsemblPlants:Os07t0108300-01
PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF373	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
UniProt:Q69UU3	SUPFAM:SSF53383	UniParc:UPI00003FE7CA	RefSeq:XP_015646972.1	SEG:seg	:

Description

Alanine transaminase 2Similar to Alanine aminotransferase. (Os07t0108300-01);Similar to Alanine aminotransferase. (Os07t0108300-02)

Coordinates

chr7:-:446195..451249

Molecular Weight (calculated)

53658.9 Da

IEP (calculated)

8.016

GRAVY (calculated)

-0.187

Length

485 amino acids

Sequence
(BLAST)

001: MFGGGGGGGR KPLDYEELNE NVKKVQYAVR GELYLRASEL QKEGKKIIFT NVGNPHALGQ KPLTFPRQVV ALCQAPFLLD DPNVGLIFPA DAIARAKHYL
101: AMAPGGLGAY SDSRGIPGIR KEVAEFIERR DGYPSDPELI YLTDGASKGV MQMLNTIIRN ERDGILVPVP QYPLYSAAIS LFGGSLVPYY LEEEANWGLD
201: FVNLRQTVAS ARSKGITVRA MVIINPGNPT GQCLSEGNIK ELLKFCFHEN LVLLADEVYQ QNIYQDERPF ISARKVLFDM GPPMSREVQL VSFHTVSKGY
301: WGECGQRGGY FEMTNLPPKT VDEIYKVASI ALSPNVPGQI FMGLMVNPPK PGDISYLKFS AESKSILESL RRRARLMTDG FNSCRNVVCN FTEGAMYSFP
401: QIRLPPKAID AAKRAGKAAD VFYCLKLLEA TGISTVPGSG FGQKEGVFHL RTTILPAEED MPAIMTSFKK FNDTFMDQYD GYSRM

Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Arabidopsis Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.