Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G119710.1 | Barley | mitochondrion | 15.31 | 85.57 |
| TraesCS7D01G060600.2 | Wheat | golgi, mitochondrion | 80.26 | 84.96 |
| HORVU7Hr1G053970.1 | Barley | mitochondrion | 11.99 | 83.33 |
| TraesCS7A01G066400.1 | Wheat | cytosol, golgi, plastid | 83.58 | 82.07 |
| TraesCS4A01G422900.1 | Wheat | golgi | 83.58 | 81.92 |
| Zm00001d045479_P001 | Maize | cytosol, peroxisome, plastid | 82.29 | 80.8 |
| EER87775 | Sorghum | plastid | 81.18 | 79.57 |
| HORVU7Hr1G012940.1 | Barley | cytosol | 82.47 | 74.62 |
| HORVU3Hr1G098750.1 | Barley | cytosol, peroxisome | 7.56 | 69.49 |
| GSMUA_Achr1P18880_001 | Banana | golgi, mitochondrion | 64.58 | 69.03 |
| PGSC0003DMT400079664 | Potato | golgi, mitochondrion, plastid | 54.06 | 58.13 |
| VIT_16s0022g02010.t01 | Wine grape | cytosol | 57.56 | 57.99 |
| VIT_00s1764g00010.t01 | Wine grape | cytosol | 37.27 | 57.88 |
| PGSC0003DMT400010000 | Potato | plastid | 58.49 | 57.64 |
| Solyc08g079750.2.1 | Tomato | plastid | 57.93 | 57.3 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 51.48 | 56.36 |
| Bra022560.1-P | Field mustard | mitochondrion, plastid | 51.84 | 56.2 |
| CDX91604 | Canola | mitochondrion, plastid | 51.84 | 56.2 |
| CDY46931 | Canola | mitochondrion, plastid | 51.84 | 56.2 |
| KRH38710 | Soybean | plastid | 54.43 | 55.77 |
| KRH77442 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 51.29 | 55.38 |
| KRH09217 | Soybean | plastid | 53.69 | 55.11 |
| KRH27993 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 50.92 | 55.09 |
| Solyc03g007070.2.1 | Tomato | cytosol | 53.87 | 54.58 |
| HORVU3Hr1G016440.3 | Barley | cytosol | 31.0 | 53.85 |
| GSMUA_Achr3P12300_001 | Banana | mitochondrion | 63.1 | 50.0 |
| Bra027008.1-P | Field mustard | cytosol | 50.0 | 49.91 |
| AT1G62960.1 | Thale cress | plastid | 51.11 | 49.73 |
| CDY45965 | Canola | cytosol | 49.82 | 49.72 |
| CDY45474 | Canola | cytosol | 47.97 | 49.71 |
| Os05t0196600-00 | Rice | cytosol | 36.35 | 43.58 |
| Os03t0727600-01 | Rice | cytosol | 37.27 | 41.48 |
| Os05t0319200-00 | Rice | cytosol, mitochondrion, plastid | 35.24 | 38.51 |
| Os04t0578000-01 | Rice | cytosol | 31.92 | 35.82 |
| Os01t0192900-00 | Rice | endoplasmic reticulum, plasma membrane | 34.87 | 35.46 |
| Os07t0617800-01 | Rice | mitochondrion | 12.73 | 20.97 |
| Os10t0390600-01 | Rice | mitochondrion | 17.34 | 19.3 |
| Os07t0108300-01 | Rice | extracellular, nucleus, plasma membrane | 17.16 | 19.18 |
| Os10t0390500-01 | Rice | cytosol, plasma membrane, plastid | 16.97 | 19.05 |
| Os03t0183600-00 | Rice | extracellular | 16.42 | 18.31 |
| Os09t0433900-01 | Rice | cytosol | 15.87 | 17.7 |
| VIT_02s0025g04980.t01 | Wine grape | cytosol, nucleus | 31.92 | 9.97 |
| Os10t0390701-00 | Rice | cytosol | 0.74 | 3.7 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:4340002 | MapMan:50.4.4 | EMBL:AK065212 | InterPro:Aminotransferase_I/II |
| ProteinID:BAA84790.1 | ProteinID:BAF18603.1 | ProteinID:BAS95974.1 | ProteinID:EEE65026.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0030170 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | EnsemblPlantsGene:Os06g0130400 | EnsemblPlants:Os06t0130400-01 |
| PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF7 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q9SNN8 | SUPFAM:SSF53383 | UniParc:UPI00000A76E6 | RefSeq:XP_015644133.1 |
| SEG:seg | : | : | : | : | : |
Description
SUBSTANDARD STARCH GRAIN6ACC synthase, Protein homologous to aminotransferase, Ethylene biosynthesis, Control of starch grain size in rice endosperm (Os06t0130400-01)
Coordinates
chr6:+:1629778..1633507
Molecular Weight (calculated)
59478.5 Da
IEP (calculated)
8.981
GRAVY (calculated)
-0.148
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRSGNGGAA KKKKKRSASA ASERRPRADG GMRIVVPLQG VVQGRGGLVL GSLIPCALFY FFQLYIKRNR ASPPPPPGSP TAASAAAVSP IHRSLSRGLL
101: APRAALPAIS ARGASVRDDD SLYYAGLRRC AADPYHPVTN PSGIIQLGLA ENYLSLDLVG RWMEEHAAEA ASMAGGEDED ERELSIRGLA AYQPYDGILA
201: LKMALAGFMR QIMQGSVSFE PSQVVITSGA TPAMEILSFC LADPGNAFLV PSPYYPGWDR DIKWRTGIEL IPVPCRSTDN FNISITALEI AYNQAKKRGI
301: KVRGVLISNP NNPTGSFVPK QTLHDLLEFA AEKNIHLISD EVFAGSTYGS GKFVSVAEVV DDLEDFDKGR VHIIYGLSKD LSLAGFRVGV IYSYNESIVT
401: AAAKIARFSS VSTPTQRLLV AMLSDQKFIS DYLKVNRERL RKMYHLFVDA LDQVGIECYK SSGGFYCWAD MSKFIRSYSE KGERKLWDRL LEEAKVNVTP
501: GSSCHCIEPG WFRCCFTTLS EHDIPVLVQR LRTITDSHKP NH
101: APRAALPAIS ARGASVRDDD SLYYAGLRRC AADPYHPVTN PSGIIQLGLA ENYLSLDLVG RWMEEHAAEA ASMAGGEDED ERELSIRGLA AYQPYDGILA
201: LKMALAGFMR QIMQGSVSFE PSQVVITSGA TPAMEILSFC LADPGNAFLV PSPYYPGWDR DIKWRTGIEL IPVPCRSTDN FNISITALEI AYNQAKKRGI
301: KVRGVLISNP NNPTGSFVPK QTLHDLLEFA AEKNIHLISD EVFAGSTYGS GKFVSVAEVV DDLEDFDKGR VHIIYGLSKD LSLAGFRVGV IYSYNESIVT
401: AAAKIARFSS VSTPTQRLLV AMLSDQKFIS DYLKVNRERL RKMYHLFVDA LDQVGIECYK SSGGFYCWAD MSKFIRSYSE KGERKLWDRL LEEAKVNVTP
501: GSSCHCIEPG WFRCCFTTLS EHDIPVLVQR LRTITDSHKP NH
001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS
Arabidopsis Description
ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.