CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022560.1-P	Field mustard	mitochondrion, plastid	98.8	98.8
CDY46931	Canola	mitochondrion, plastid	98.8	98.8
AT5G51690.1	Thale cress	golgi, mitochondrion	89.8	90.71
HORVU7Hr1G053970.1	Barley	mitochondrion	10.0	64.1
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	63.4	62.9
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	7.2	61.02
VIT_16s0022g02010.t01	Wine grape	cytosol	64.8	60.22
HORVU2Hr1G119710.1	Barley	mitochondrion	11.6	59.79
KRH38710	Soybean	plastid	61.8	58.41
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	58.4	58.05
KRH09217	Soybean	plastid	61.2	57.95
Solyc03g007070.2.1	Tomato	cytosol	62.0	57.94
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	57.8	57.0
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	54.6	53.32
Os06t0130400-01	Rice	plasma membrane	56.2	51.84
EER87775	Sorghum	plastid	57.0	51.54
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	56.6	51.27
TraesCS4A01G422900.1	Wheat	golgi	55.6	50.27
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	55.0	49.82
CDY45965	Canola	cytosol	50.8	46.78
CDY45474	Canola	cytosol	48.4	46.27
HORVU7Hr1G012940.1	Barley	cytosol	54.6	45.58
CDY66472	Canola	cytosol	35.8	44.42
CDX75675	Canola	cytosol	38.4	42.57
CDY23035	Canola	cytosol	38.8	41.63
GSMUA_Achr3P12300_001	Banana	mitochondrion	56.8	41.52
CDX94359	Canola	cytosol	37.2	41.52
CDY02111	Canola	cytosol	39.0	41.49
CDY08163	Canola	cytosol	39.0	41.49
CDY69462	Canola	cytosol	38.8	41.36
CDY71142	Canola	cytosol	37.0	41.29
CDY05953	Canola	cytosol	38.8	41.28
CDX69326	Canola	cytosol	38.6	41.15
CDX89355	Canola	cytosol	36.8	41.07
CDY72652	Canola	cytosol	16.2	40.3
CDY42751	Canola	cytosol	36.2	40.13
CDX89520	Canola	cytosol	37.4	39.45
CDX92755	Canola	cytosol	32.8	39.42
CDX81296	Canola	cytosol	34.6	39.41
CDY18674	Canola	cytosol	34.6	39.41
CDY25639	Canola	cytosol	37.2	39.24
CDY34015	Canola	cytosol	35.8	38.58
CDX83146	Canola	cytosol	35.6	38.36
CDY15174	Canola	cytosol	35.8	36.09
CDY11360	Canola	cytosol	34.0	35.94
CDX90035	Canola	cytosol	32.0	35.79
CDY65356	Canola	cytosol	33.6	35.52
CDX86796	Canola	cytosol	33.8	34.63
CDY13251	Canola	cytosol	33.4	34.01
HORVU3Hr1G016440.3	Barley	cytosol	20.4	32.69
CDY43579	Canola	cytosol, mitochondrion, plastid	8.8	22.92
CDX91708	Canola	peroxisome	17.0	21.09
CDY25780	Canola	peroxisome	16.8	20.84
CDY66294	Canola	cytosol	18.8	19.54
CDY61225	Canola	peroxisome	18.6	19.33
CDY44130	Canola	cytosol	18.4	19.25
CDY41452	Canola	peroxisome	18.4	19.25
CDY04729	Canola	cytosol	18.4	19.25
CDX83914	Canola	mitochondrion	20.6	19.04
CDY26256	Canola	mitochondrion	20.4	18.99
CDY48485	Canola	plastid	20.2	18.7
CDY21752	Canola	mitochondrion	20.4	18.65
CDX96776	Canola	mitochondrion	20.2	18.63
CDX81815	Canola	mitochondrion	20.4	18.58
CDY50645	Canola	cytosol	7.8	18.06
CDY12474	Canola	peroxisome, plastid	18.4	17.13
CDY03822	Canola	cytosol	4.4	17.05
CDX68271	Canola	mitochondrion	4.2	16.41
CDX83913	Canola	cytosol, nucleus, peroxisome	4.2	16.41
CDY25781	Canola	cytosol	1.8	15.52
CDX86161	Canola	cytosol	3.8	14.39
CDX68272	Canola	nucleus	2.8	12.61
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.2	12.21
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.2	12.21
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.2	12.21

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	GO:A0A078DT05	InterPro:Aminotransferase_I/II	EnsemblPlants:CDX91604
ProteinID:CDX91604	ProteinID:CDX91604.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00153028001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00155	PRINTS:PR00753	PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI0004EDBCDE	SEG:seg	:

Description

BnaC02g15560D

Coordinates

chrLK031868:-:878006..880821

Molecular Weight (calculated)

55303.8 Da

IEP (calculated)

6.509

GRAVY (calculated)

0.041

Length

500 amino acids

Sequence
(BLAST)

001: MRLIVPLQGV VQGRGGLFVG SLIPCCLFYF LQLYLKRRRS PPPPDSDSTE LPRTSSRSSL FTRGNSIGRV RVSSRAAPLA KPPDSPYYIG LERVKTDPYD
101: RVTNRDGIIQ LGLAESTLCF DLLQRWMSDN LMESLMIQSD VDGGFDVSSI AMYQPFEGLL EVRVAFADFM SRIMGGNVSF DPSNMVITAG GTPAVEVLAF
201: CLADHGNAFL IPSPYYPGFD RDIKFRTGIE LIPVHCRSSD NFTVTVSALE QSLSQARKRG SKVSGILFSN PSNPVGNILS RETLHAILSF AQEKNIHVIS
301: DEIFAGSVYG DKEFVSMAEV AASGDFDKSR VHIIYGLSKD LSLPGFRTGV IYSFHEDVVS AAKKLMRFCS MPVPVQRILI SLLSDTRFIE EYMAAHRQRI
401: RDKHFLFVEG LKQLGIPCAE SGGGLYCWVD MSSLLTSYSE KGELELFEKL LSVAKINATP GTACYCIEPG WFRCCFTALA DEDIPVIMER IKLLAESSTS

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.