CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38710	Soybean	plastid	95.83	95.65
VIT_16s0022g02010.t01	Wine grape	cytosol	65.72	64.5
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	61.55	64.48
Solyc03g007070.2.1	Tomato	cytosol	63.45	62.62
Bra022560.1-P	Field mustard	mitochondrion, plastid	58.14	61.4
CDY46931	Canola	mitochondrion, plastid	58.14	61.4
CDX91604	Canola	mitochondrion, plastid	57.95	61.2
HORVU2Hr1G119710.1	Barley	mitochondrion	11.17	60.82
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	57.58	60.44
AT5G51690.1	Thale cress	golgi, mitochondrion	56.63	60.4
HORVU7Hr1G053970.1	Barley	mitochondrion	8.9	60.26
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	57.01	59.37
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	54.17	55.86
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	6.06	54.24
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	51.33	54.09
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.33	53.98
Os06t0130400-01	Rice	plasma membrane	55.11	53.69
EER87775	Sorghum	plastid	55.68	53.16
TraesCS4A01G422900.1	Wheat	golgi	55.49	52.98
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	55.3	52.9
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	54.92	52.54
HORVU7Hr1G012940.1	Barley	cytosol	55.3	48.75
KRH61460	Soybean	cytosol	30.3	45.71
KRH60148	Soybean	cytosol	36.17	43.41
KRH41440	Soybean	cytosol	35.98	43.18
KRH49039	Soybean	cytosol	36.17	42.83
KRH74169	Soybean	cytosol	35.98	42.6
GSMUA_Achr3P12300_001	Banana	mitochondrion	54.92	42.4
KRH65284	Soybean	cytosol	9.85	42.28
KRH52156	Soybean	cytosol	35.8	40.47
KRH04373	Soybean	cytosol	35.98	40.0
KRH77167	Soybean	cytosol	35.61	40.0
KRH58165	Soybean	cytosol	35.98	39.58
KRH28319	Soybean	cytosol	35.04	39.28
KRH41241	Soybean	cytosol	34.09	37.19
KRH59970	Soybean	cytosol	33.9	36.98
HORVU3Hr1G016440.3	Barley	cytosol	21.59	36.54
KRH48058	Soybean	cytosol	32.77	36.5
KRH27892	Soybean	cytosol	32.77	36.04
KRH06585	Soybean	cytosol	32.2	35.87
KRH00855	Soybean	cytosol	32.01	35.21
KRH40379	Soybean	cytosol	31.63	34.43
KRH74536	Soybean	cytosol	15.91	17.46
KRH69622	Soybean	cytosol	15.91	17.46
KRH06285	Soybean	mitochondrion	17.61	17.35
KRH47719	Soybean	endoplasmic reticulum	17.61	17.19

Protein Annotations

EntrezGene:100800539	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	EMBL:ACUP02010275	InterPro:Aminotransferase_I/II
EnsemblPlantsGene:GLYMA_16G203600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	UniProt:I1MQ81
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH09217	ProteinID:KRH09217	ProteinID:KRH09217.1	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000233EEFA	SEG:seg

Description

hypothetical protein

Coordinates

chr16:+:36457598..36461359

Molecular Weight (calculated)

58440.5 Da

IEP (calculated)

8.629

GRAVY (calculated)

-0.100

Length

528 amino acids

Sequence
(BLAST)

001: MTQSRKPRKP NPQAREAQQN HPSSSFSSSG MKLIVPLQGV VQGRGGLLLG TLVPCALFYF LQLYLKRRRS NFSPPSPSEP TLPRTSSRSS LSTRGSISRV
101: RVSKLATQIS RPDESLYYVG LERVSRDPYD ALENPNGIIQ LGLSDNKLCL DLIGEWVARN LEGSISGGVG LGINGIVPYQ TFDGVMELKM ALSDFMHQVI
201: GGSVKFDPSN MVLTAGATPA IEILSFCLAD HGNAFLVPTP YYPGFDRDVR WRPGVDLIPV HCRSTDNFDL NITALEQAFS QARKRGVKVR GILISNPSNP
301: VGNMMTQDML YSLLDFAEEK NIHIIADEVF AGSTYGSEKF VSIAEILNSD YIDKSRVHII YGLSKDLSLA GFRVGVICSF NESVLAAAKK LSRFSSISAP
401: TQRLVTSMLS DKRFIREYFE TNQKRIRQVH DEFVGCLSKL GIKCAKSSAG MYCWADMSGL IRPYSEKGEI ELWEKFLSVA KINITPGSAC HCIEPGWFRI
501: CFTTITLEEI PLVIERVRKV VESCDSSS

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.