CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 5
endoplasmic reticulum 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	91.43	91.62
VIT_00s1764g00010.t01	Wine grape	cytosol	44.22	63.61
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	58.37	58.25
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	58.37	57.79
Solyc08g079750.2.1	Tomato	plastid	62.15	56.93
PGSC0003DMT400010000	Potato	plastid	61.75	56.36
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	56.37	55.27
HORVU7Hr1G053970.1	Barley	mitochondrion	8.17	52.56
AT1G62960.1	Thale cress	plastid	57.57	51.89
KRH38710	Soybean	plastid	54.58	51.8
HORVU2Hr1G119710.1	Barley	mitochondrion	9.96	51.55
CDY45474	Canola	cytosol	53.59	51.43
KRH09217	Soybean	plastid	53.98	51.33
Os06t0130400-01	Rice	plasma membrane	55.38	51.29
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	56.37	51.27
TraesCS4A01G422900.1	Wheat	golgi	56.37	51.18
EER87775	Sorghum	plastid	55.98	50.81
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	55.78	50.72
CDY45965	Canola	cytosol	54.38	50.28
Bra027008.1-P	Field mustard	cytosol	54.18	50.09
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.78	49.15
HORVU7Hr1G012940.1	Barley	cytosol	56.18	47.08
KRH60148	Soybean	cytosol	37.65	42.95
KRH41440	Soybean	cytosol	37.25	42.5
KRH49039	Soybean	cytosol	37.45	42.15
KRH74169	Soybean	cytosol	36.85	41.48
GSMUA_Achr3P12300_001	Banana	mitochondrion	55.98	41.08
KRH61460	Soybean	cytosol	28.49	40.86
KRH52156	Soybean	cytosol	35.46	38.12
KRH27892	Soybean	cytosol	36.26	37.92
KRH04373	Soybean	cytosol	35.06	37.05
KRH28319	Soybean	cytosol	34.66	36.94
KRH58165	Soybean	cytosol	35.26	36.88
KRH65284	Soybean	cytosol	8.96	36.59
KRH41241	Soybean	cytosol	35.26	36.57
KRH77167	Soybean	cytosol	34.06	36.38
KRH59970	Soybean	cytosol	34.86	36.16
KRH06585	Soybean	cytosol	33.07	35.02
KRH48058	Soybean	cytosol	33.07	35.02
KRH00855	Soybean	cytosol	33.47	35.0
KRH40379	Soybean	cytosol	33.07	34.23
HORVU3Hr1G016440.3	Barley	cytosol	19.72	31.73
KRH69622	Soybean	cytosol	16.14	16.84
KRH74536	Soybean	cytosol	16.14	16.84
KRH06285	Soybean	mitochondrion	16.33	15.3
KRH47719	Soybean	endoplasmic reticulum	16.33	15.16
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	33.07	9.56

Protein Annotations

EntrezGene:100783063	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	EMBL:ACUP02000673	InterPro:Aminotransferase_I/II
EnsemblPlantsGene:GLYMA_01G213700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	UniProt:I1JA08
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH77442	ProteinID:KRH77442	ProteinID:KRH77442.1	PFAM:PF00155
PRINTS:PR00753	PANTHER:PTHR43795	PANTHER:PTHR43795:SF11	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI00023374F8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:54486765..54489728

Molecular Weight (calculated)

55576.8 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.049

Length

502 amino acids

Sequence
(BLAST)

001: MRVIVPLQGL VQGTGGLFWG SVIPCALLYF LQLYLRTKPC HHPQPPPSHK DQDQDSTSFH RSLSSNHRHS TSSASAYVSP RANSLTAANS PYYLGLHKVA
101: VDPYHQTHNP HGVIQLALHQ NTLSLDLIQD WIHLNGSAAV LGTPLGISRI VPYQPLHGLM DLKVAVAGFM YQVLENLIFF NTSRMVLTAG ATSAIEILSF
201: CLADNGNAFL VPTPLSPGFD GVVKWRTGVE IVPVPCRSTD DFNLSITSLE RTFKQAKMRG QKVRGIIINN PSNPAGKLFD RETLLDLLDF AREKNIHIIS
301: NEMFAGSSYG NEEFVSMAEI MEAEDHDRDR VHIVFGLSNE LSVPGLKVGV IYSYNDNVVA ASSKLARFST VSAPTQRLLI SMLSDTSFVQ KFIEVNRLRL
401: RKMYNTFVAG LKQLGIECTR SSGGFCCWAD MSRLIGSYSE KGELELWDRL LNVAKINVTP GSSCHCIEPG WFRFCFATST EKDVSVVMER IRRTVDATNG
501: HG

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.