Factsheet for GSMUA_Achr1P18880_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G119710.1	Barley	mitochondrion	13.21	69.07
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	67.06	67.59
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	67.65	66.99
HORVU7Hr1G053970.1	Barley	mitochondrion	10.26	66.67
Os06t0130400-01	Rice	plasma membrane	69.03	64.58
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	7.5	64.41
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	68.44	62.86
TraesCS4A01G422900.1	Wheat	golgi	68.24	62.57
EER87775	Sorghum	plastid	67.85	62.21
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	61.74	62.1
VIT_00s1764g00010.t01	Wine grape	cytosol	42.6	61.89
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	67.26	61.78
GSMUA_Achr3P12300_001	Banana	mitochondrion	81.85	60.67
Solyc08g079750.2.1	Tomato	plastid	65.09	60.22
PGSC0003DMT400010000	Potato	plastid	65.09	60.0
VIT_16s0022g02010.t01	Wine grape	cytosol	62.52	58.92
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	57.79	58.37
CDY46931	Canola	mitochondrion, plastid	57.4	58.2
Bra022560.1-P	Field mustard	mitochondrion, plastid	57.4	58.2
AT5G51690.1	Thale cress	golgi, mitochondrion	56.8	58.18
CDX91604	Canola	mitochondrion, plastid	57.0	57.8
KRH38710	Soybean	plastid	59.96	57.47
HORVU7Hr1G012940.1	Barley	cytosol	67.85	57.43
Solyc03g007070.2.1	Tomato	cytosol	60.55	57.38
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	56.41	57.09
KRH09217	Soybean	plastid	59.37	57.01
CDY45965	Canola	cytosol	56.02	52.3
Bra027008.1-P	Field mustard	cytosol	55.82	52.12
AT1G62960.1	Thale cress	plastid	56.8	51.71
CDY45474	Canola	cytosol	52.86	51.24
HORVU3Hr1G016440.3	Barley	cytosol	26.43	42.95
GSMUA_Achr3P25830_001	Banana	mitochondrion	37.87	42.76
GSMUA_Achr10P...	Banana	cytosol	36.69	42.27
GSMUA_Achr1P14280_001	Banana	nucleus	38.07	42.23
GSMUA_Achr1P04420_001	Banana	cytosol	37.48	41.13
GSMUA_AchrUn_...	Banana	cytosol	35.7	40.86
GSMUA_Achr4P30870_001	Banana	cytosol	33.92	40.76
GSMUA_Achr2P08600_001	Banana	cytosol	37.08	40.6
GSMUA_Achr5P08880_001	Banana	cytosol	37.08	40.34
GSMUA_Achr4P01340_001	Banana	mitochondrion	36.49	40.04
GSMUA_Achr4P29150_001	Banana	cytosol	37.28	38.89
GSMUA_Achr4P24930_001	Banana	cytosol	36.49	38.46
GSMUA_Achr6P29540_001	Banana	cytosol	18.15	19.13
GSMUA_Achr8P15810_001	Banana	cytosol	17.95	18.92
GSMUA_Achr2P07320_001	Banana	cytosol	17.55	18.28
GSMUA_Achr11P...	Banana	mitochondrion	17.95	17.91
GSMUA_Achr10P...	Banana	mitochondrion	17.16	16.63
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	34.91	10.2

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr1G18880_001	EnsemblPlants:GSMUA_Achr1P18880_001	EnsemblPlants:GSMUA_Achr1T18880_001	InterPro:IPR015421
InterPro:IPR015422	UniProt:M0S146	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
TMHMM:TMhelix	UniParc:UPI0002962A8B	SEG:seg	:	:	:

Description

Probable aminotransferase ACS12 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18880_001]

Coordinates

chr1:+:14122481..14126525

Molecular Weight (calculated)

55842.2 Da

IEP (calculated)

7.334

GRAVY (calculated)

-0.021

Length

507 amino acids

Sequence
(BLAST)

001: MRVIVPLQAV VQGRGGLVLG SLIPCALFYF LQFYLRRNRP SSSSPPPPSS ASGSNLPELA SIPRSLSRGL LSPRGSFGPA RLSSRGTAVV RDDDNPYYVG
101: LKRCADDPYN RSINPQGFLL LGLAENRLSL DIIQDWLVKN WKESLLLDDE EEELSIQGLA TYQPYDGSMD LKTAVAEFMG QVMQGSVSFN PSHVVLTAGA
201: TPAVETLGFC LADPGDAFLV PSPYYPGWDR DIKWRTGVEL IPVPCRSTDN FSISIAALEL AYNQVKKRGM KVRAVLVSNP SNPVGSLIDR ETLCGLLDFV
301: MEKNIHLISD EIFAGSTYGS DKFVSVAEVL DAESFDKSRV HIIYGLSKDL AVPGFRVGVI YSYNENVLAA ASKLARFSSI SAPTQRLLIS MLSDRKFISE
401: YLAVNRARLH DMHALFVDGL KQLGIKCASS SGGFYCWADM SMFIRPYSEK GELKLWDNLL NVAKVNVTPG SSCHCIEPGW FRCCFTTLTE KDVPTVMERI
501: QKITKSN

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.