Factsheet for GSMUA_Achr10P27570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P04420_001
GSMUA_Achr1P14280_001
GSMUA_Achr2P08600_001
GSMUA_Achr3P25830_001
GSMUA_Achr4P01340_001
GSMUA_Achr4P30870_001
GSMUA_Achr5P08880_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	GSMUA_Achr1P04420_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr1P14280_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr2P08600_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr3P25830_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr4P01340_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr5P08880_001	AT2G22810.1	14983000
AT4G26200.1	GSMUA_Achr10P...	AT4G26200.1	14983000
AT4G26200.1	GSMUA_Achr4P30870_001	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30870_001	Banana	cytosol	74.32	77.49
KRH41440	Soybean	cytosol	72.27	72.27
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	72.27	71.46
KRH60148	Soybean	cytosol	71.36	71.36
KRH49039	Soybean	cytosol	72.27	71.3
KRH74169	Soybean	cytosol	71.36	70.4
Solyc07g026900.1.1	Tomato	cytosol	69.77	69.61
Solyc12g008740.1.1	Tomato	cytosol	67.95	68.89
AT4G26200.1	Thale cress	cytosol	69.77	68.68
CDX89355	Canola	cytosol	69.32	68.08
CDX94359	Canola	cytosol	69.32	68.08
Bra026456.1-P	Field mustard	cytosol	69.09	67.86
CDY72652	Canola	cytosol	30.91	67.66
CDY71142	Canola	cytosol	68.86	67.63
Bra019117.1-P	Field mustard	cytosol	68.41	66.74
CDY42751	Canola	cytosol	68.41	66.74
TraesCS3D01G108700.1	Wheat	cytosol, plastid	68.18	66.37
CDX92755	Canola	cytosol	62.5	66.11
Zm00001d039487_P001	Maize	mitochondrion	69.32	66.02
TraesCS3A01G106600.1	Wheat	cytosol, plastid	67.73	65.93
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.09	65.66
TraesCS3B01G125200.1	Wheat	plastid	67.73	65.49
Os05t0196600-00	Rice	cytosol	64.09	62.39
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	58.18	59.53
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	64.09	56.85
GSMUA_Achr1P14280_001	Banana	nucleus	57.5	55.36
GSMUA_Achr3P25830_001	Banana	mitochondrion	56.36	55.23
GSMUA_Achr1P04420_001	Banana	cytosol	57.5	54.76
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	66.14	54.6
GSMUA_Achr4P01340_001	Banana	mitochondrion	57.05	54.33
GSMUA_Achr5P08880_001	Banana	cytosol	57.27	54.08
GSMUA_Achr2P08600_001	Banana	cytosol	56.82	54.0
GSMUA_AchrUn_...	Banana	cytosol	50.91	50.56
GSMUA_Achr4P29150_001	Banana	cytosol	55.0	49.79
GSMUA_Achr4P24930_001	Banana	cytosol	53.18	48.65
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	42.27	36.69
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	41.36	36.18
PGSC0003DMT400092723	Potato	cytosol	9.09	34.19
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	14.77	28.14
GSMUA_Achr3P12300_001	Banana	mitochondrion	42.5	27.34
GSMUA_Achr8P15810_001	Banana	cytosol	18.86	17.26
GSMUA_Achr11P...	Banana	mitochondrion	19.77	17.13
GSMUA_Achr6P29540_001	Banana	cytosol	18.64	17.05
GSMUA_Achr2P07320_001	Banana	cytosol	18.41	16.63
GSMUA_Achr10P...	Banana	mitochondrion	19.09	16.06

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr10G27570_001
EnsemblPlants:GSMUA_Achr10P27570_001	EnsemblPlants:GSMUA_Achr10T27570_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0RLY1	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000294B232	:	:

Description

1-aminocyclopropane-1-carboxylate synthase 7 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27570_001]

Coordinates

chr10:+:30681506..30683062

Molecular Weight (calculated)

49312.8 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.212

Length

440 amino acids

Sequence
(BLAST)

001: MAKKGVPLSE MATSDTHGED SPYFVGWKVY DENPYDAASN PSGVIQMGLA ENQVSFDLLE DYLEQHPQEF GWGCGVSSFR ENALFQDYHG LKTFTRAVAL
101: FMEQIRGGRT QFDPQHIVLT AGATAANELL TFILADPGDG LLIPTPYYPG FDRDLRWRTG VNIIPVHCNS SNGFQITLRA LEDACAGAES MKVRVKGLLL
201: TNPSNPLGTT ITRPVLEEIL DFVAHKDIHL ISDEIYSGSV FSSDEFVSMT EIVESRGHQE RERVHIVYSL SKDLGLPGYR VGTIYSYNNE VVTTARRMSS
301: FTLVSSQTQK MLASLLSDKE FTENYLRTNR ERLKKRYEFV VEGLSNAGIR CLQGNAGLFC WMNLGELLEE PTVEGELSLW NLMLHEAKLN ISPGSSCHCL
401: EAGWFRVCFA NMSQQTLEVA LMRMKDFTEK MKAKQMISSL

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.