Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42751 | Canola | cytosol | 98.01 | 43.68 |
| AT4G26200.1 | Thale cress | cytosol | 91.54 | 41.16 |
| CDX94359 | Canola | cytosol | 91.54 | 41.07 |
| CDX89355 | Canola | cytosol | 91.54 | 41.07 |
| CDY71142 | Canola | cytosol | 90.55 | 40.62 |
| CDX92755 | Canola | cytosol | 81.09 | 39.18 |
| KRH41440 | Soybean | cytosol | 79.6 | 36.36 |
| KRH60148 | Soybean | cytosol | 79.1 | 36.14 |
| KRH49039 | Soybean | cytosol | 79.6 | 35.87 |
| KRH74169 | Soybean | cytosol | 79.1 | 35.65 |
| VIT_11s0016g02560.t01 | Wine grape | cytosol, nucleus, peroxisome | 75.62 | 34.16 |
| Solyc07g026900.1.1 | Tomato | cytosol | 74.13 | 33.79 |
| PGSC0003DMT400000771 | Potato | cytosol | 71.14 | 32.95 |
| Solyc12g008740.1.1 | Tomato | cytosol | 70.65 | 32.72 |
| GSMUA_Achr4P30870_001 | Banana | cytosol | 68.66 | 32.7 |
| PGSC0003DMT400043903 | Potato | cytosol | 71.64 | 32.65 |
| EES00139 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 74.13 | 32.18 |
| TraesCS3B01G125200.1 | Wheat | plastid | 72.64 | 32.09 |
| TraesCS3D01G108700.1 | Wheat | cytosol, plastid | 71.64 | 31.86 |
| TraesCS3A01G106600.1 | Wheat | cytosol, plastid | 71.64 | 31.86 |
| Zm00001d039487_P001 | Maize | mitochondrion | 72.64 | 31.6 |
| GSMUA_Achr10P... | Banana | cytosol | 67.66 | 30.91 |
| Os05t0196600-00 | Rice | cytosol | 69.15 | 30.75 |
| CDY66472 | Canola | cytosol | 57.71 | 28.78 |
| Os05t0319200-00 | Rice | cytosol, mitochondrion, plastid | 70.15 | 28.43 |
| Os01t0192900-00 | Rice | endoplasmic reticulum, plasma membrane | 71.64 | 27.02 |
| CDX81296 | Canola | cytosol | 56.72 | 25.97 |
| CDY18674 | Canola | cytosol | 56.22 | 25.74 |
| CDY69462 | Canola | cytosol | 59.2 | 25.37 |
| CDX75675 | Canola | cytosol | 56.72 | 25.28 |
| CDY11360 | Canola | cytosol | 57.21 | 24.31 |
| CDX69326 | Canola | cytosol | 56.72 | 24.31 |
| CDY65356 | Canola | cytosol | 56.72 | 24.1 |
| CDY02111 | Canola | cytosol | 56.22 | 24.04 |
| CDY08163 | Canola | cytosol | 56.22 | 24.04 |
| CDY05953 | Canola | cytosol | 55.72 | 23.83 |
| CDY23035 | Canola | cytosol | 55.22 | 23.82 |
| CDY34015 | Canola | cytosol | 54.73 | 23.71 |
| CDY25639 | Canola | cytosol | 55.72 | 23.63 |
| CDX83146 | Canola | cytosol | 54.23 | 23.49 |
| HORVU3Hr1G019430.6 | Barley | cytosol, mitochondrion | 50.25 | 23.49 |
| HORVU3Hr1G019410.1 | Barley | endoplasmic reticulum | 26.87 | 23.38 |
| CDX89520 | Canola | cytosol | 54.73 | 23.21 |
| CDX86796 | Canola | cytosol | 55.72 | 22.95 |
| CDY13251 | Canola | cytosol | 55.72 | 22.81 |
| CDY15174 | Canola | cytosol | 55.22 | 22.38 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 20.4 | 21.35 |
| CDX90035 | Canola | cytosol | 39.3 | 17.67 |
| CDY25781 | Canola | cytosol | 4.98 | 17.24 |
| CDY46931 | Canola | mitochondrion, plastid | 41.29 | 16.6 |
| CDX91604 | Canola | mitochondrion, plastid | 40.3 | 16.2 |
| CDY45965 | Canola | cytosol | 36.82 | 13.63 |
| CDY45474 | Canola | cytosol | 34.83 | 13.38 |
| CDX68272 | Canola | nucleus | 6.47 | 11.71 |
| CDY41452 | Canola | peroxisome | 20.4 | 8.58 |
| CDY61225 | Canola | peroxisome | 20.4 | 8.52 |
| CDY04729 | Canola | cytosol | 19.9 | 8.37 |
| CDY44130 | Canola | cytosol | 19.9 | 8.37 |
| CDY66294 | Canola | cytosol | 19.9 | 8.32 |
| CDY26256 | Canola | mitochondrion | 21.39 | 8.01 |
| CDY48485 | Canola | plastid | 20.9 | 7.78 |
| CDX83914 | Canola | mitochondrion | 20.9 | 7.76 |
| CDY03822 | Canola | cytosol | 4.98 | 7.75 |
| CDY25780 | Canola | peroxisome | 15.42 | 7.69 |
| CDY21752 | Canola | mitochondrion | 20.9 | 7.68 |
| CDX81815 | Canola | mitochondrion | 20.9 | 7.65 |
| CDX96776 | Canola | mitochondrion | 20.4 | 7.56 |
| CDX91708 | Canola | peroxisome | 14.93 | 7.44 |
| CDY12474 | Canola | peroxisome, plastid | 18.41 | 6.89 |
| CDX86161 | Canola | cytosol | 4.48 | 6.82 |
| CDY50645 | Canola | cytosol | 6.97 | 6.48 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 1.0 | 1.56 |
| CDX68271 | Canola | mitochondrion | 0.5 | 0.78 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:50.4.4 | GO:A0A078K422 | UniProt:A0A078K422 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY72652 | ProteinID:CDY72652 | ProteinID:CDY72652.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00034203001 | InterPro:IPR015421 |
| InterPro:IPR015422 | PFAM:PF00155 | PRINTS:PR00753 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF28 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EF351F | SEG:seg | : |
Description
BnaCnng78650DBnaCnng78650D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K422]
Coordinates
chrLK052453:-:211..1146
Molecular Weight (calculated)
22575.4 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.554
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLPLMINND DNNNNKVELS RVAVSDTHGE DSPYFAGWKA YDENPYDESH NPSGVIQMGL AENQVSFDLL ESYLEKKNPE GSLWESKGSR GFRENALFQD
101: YHGLKNFRQA MASFMEKIRG GKARFDPDRI VLTAGATAAN ELLTFILANP NDALLVPTPY YPGFDRDLRW RTGVRIVPIH CDSSNHFQIT PEALEAAYKT
201: A
101: YHGLKNFRQA MASFMEKIRG GKARFDPDRI VLTAGATAAN ELLTFILANP NDALLVPTPY YPGFDRDLRW RTGVRIVPIH CDSSNHFQIT PEALEAAYKT
201: A
001: MKQLSRKVTS NAHGQDSSYF LGWEEYEKNP YDEIKNPNGI IQMGLAENQL CFDLIETWLA KNPDAAGLKK DGQSIFKELA LFQDYHGLPE FKKALAEFME
101: EIRGNRVTFD PSKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTMLTR RELNLLVDFI TSKNIHLISD EIYSGTVFGF EQFVSVMDVL KDKNLENSEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSTYLDENQ KRLKIRQKKL VSGLEAAGIT CLKSNAGLFC WVDMRHLLDT NTFEAELELW KKIVYDVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA MKRLKEYVES TDSRRVISKS SHDRIKSLRK RTVSNWVFRV SWTDRVPDER
101: EIRGNRVTFD PSKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTMLTR RELNLLVDFI TSKNIHLISD EIYSGTVFGF EQFVSVMDVL KDKNLENSEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSTYLDENQ KRLKIRQKKL VSGLEAAGIT CLKSNAGLFC WVDMRHLLDT NTFEAELELW KKIVYDVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA MKRLKEYVES TDSRRVISKS SHDRIKSLRK RTVSNWVFRV SWTDRVPDER
Arabidopsis Description
ACS91-aminocyclopropane-1-carboxylate synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Y8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.