Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25781 | Canola | cytosol | 9.3 | 20.69 |
| CDY61225 | Canola | peroxisome | 51.94 | 13.93 |
| CDY66294 | Canola | cytosol | 51.16 | 13.72 |
| CDY04729 | Canola | cytosol | 48.84 | 13.18 |
| CDY44130 | Canola | cytosol | 48.84 | 13.18 |
| CDY25780 | Canola | peroxisome | 39.53 | 12.66 |
| CDY41452 | Canola | peroxisome | 46.51 | 12.55 |
| CDX91708 | Canola | peroxisome | 37.98 | 12.16 |
| CDY50645 | Canola | cytosol | 20.16 | 12.04 |
| CDY12474 | Canola | peroxisome, plastid | 49.61 | 11.92 |
| CDX83914 | Canola | mitochondrion | 41.09 | 9.8 |
| CDX96776 | Canola | mitochondrion | 41.09 | 9.78 |
| CDY21752 | Canola | mitochondrion | 39.53 | 9.32 |
| CDY26256 | Canola | mitochondrion | 38.76 | 9.31 |
| CDX81815 | Canola | mitochondrion | 39.53 | 9.29 |
| CDY48485 | Canola | plastid | 38.76 | 9.26 |
| CDX92755 | Canola | cytosol | 20.16 | 6.25 |
| CDY42751 | Canola | cytosol | 20.16 | 5.76 |
| CDX89355 | Canola | cytosol | 18.6 | 5.36 |
| CDX94359 | Canola | cytosol | 18.6 | 5.36 |
| CDY71142 | Canola | cytosol | 18.6 | 5.36 |
| CDX86161 | Canola | cytosol | 5.43 | 5.3 |
| CDY72652 | Canola | cytosol | 7.75 | 4.98 |
| CDY66472 | Canola | cytosol | 14.73 | 4.71 |
| CDX75675 | Canola | cytosol | 15.5 | 4.43 |
| CDX89520 | Canola | cytosol | 16.28 | 4.43 |
| CDX91604 | Canola | mitochondrion, plastid | 17.05 | 4.4 |
| CDY46931 | Canola | mitochondrion, plastid | 17.05 | 4.4 |
| CDY18674 | Canola | cytosol | 14.73 | 4.33 |
| CDX81296 | Canola | cytosol | 14.73 | 4.33 |
| CDX83146 | Canola | cytosol | 15.5 | 4.31 |
| CDY34015 | Canola | cytosol | 15.5 | 4.31 |
| CDX86796 | Canola | cytosol | 16.28 | 4.3 |
| CDY13251 | Canola | cytosol | 16.28 | 4.28 |
| CDX69326 | Canola | cytosol | 15.5 | 4.26 |
| CDY25639 | Canola | cytosol | 15.5 | 4.22 |
| CDY23035 | Canola | cytosol | 14.73 | 4.08 |
| CDY45965 | Canola | cytosol | 17.05 | 4.05 |
| CDY69462 | Canola | cytosol | 14.73 | 4.05 |
| CDY05953 | Canola | cytosol | 14.73 | 4.04 |
| CDY08163 | Canola | cytosol | 14.73 | 4.04 |
| CDY02111 | Canola | cytosol | 14.73 | 4.04 |
| CDY15174 | Canola | cytosol | 15.5 | 4.03 |
| CDX90035 | Canola | cytosol | 13.95 | 4.03 |
| CDY65356 | Canola | cytosol | 14.73 | 4.02 |
| CDY11360 | Canola | cytosol | 14.73 | 4.02 |
| CDY45474 | Canola | cytosol | 15.5 | 3.82 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 4.65 | 3.12 |
| CDX68272 | Canola | nucleus | 2.33 | 2.7 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 1.55 | 1.56 |
| CDX68271 | Canola | mitochondrion | 0.78 | 0.78 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.640.10 | MapMan:35.1 | GO:A0A078ES00 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDY03822 | ProteinID:CDY03822 |
| ProteinID:CDY03822.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00117270001 | InterPro:IPR015421 | PFAM:PF00155 | PANTHER:PTHR11751 |
| PANTHER:PTHR11751:SF373 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EDFEB3 | : |
Description
BnaC01g29390D
Coordinates
chrLK031946:-:930932..932004
Molecular Weight (calculated)
14624.8 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.100
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MTACVISGVD HLVNSENVSQ KLVDYESLNG DVKKYQYAIR ANLVYSLLVL WISKHILSGE NLVNAGSVLI PVRAMVIINP RNPSGQCLSE ANLREILRFC
101: CDERLVLFRD KVYQQNIYKD ERPSSAPRK
101: CDERLVLFRD KVYQQNIYKD ERPSSAPRK
001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M
Arabidopsis Description
GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [cytosol,nucleus,peroxisome]
SUBAcon: [cytosol,nucleus,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.