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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016202.1-P Field mustard cytosol 98.96 98.76
CDY61225 Canola peroxisome 98.75 98.75
AT1G70580.1 Thale cress cytosol, nucleus, peroxisome 96.05 96.05
CDX91589 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 25.78 94.66
CDX88411 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 25.78 94.66
CDX86159 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 25.78 94.66
CDY04729 Canola cytosol 91.89 92.47
CDY44130 Canola cytosol 91.89 92.47
CDY41452 Canola peroxisome 91.27 91.84
CDX91708 Canola peroxisome 76.72 91.56
CDY25780 Canola peroxisome 76.3 91.07
CDY25781 Canola cytosol 10.81 89.66
VIT_00s0225g00130.t01 Wine grape cytosol 87.53 87.53
KRH69622 Soybean cytosol 86.28 86.28
KRH74536 Soybean cytosol 86.07 86.07
PGSC0003DMT400047918 Potato cytosol 85.86 85.86
Solyc05g013380.2.1 Tomato extracellular, nucleus, plastid 85.86 85.86
GSMUA_Achr6P29540_001 Banana cytosol 84.82 84.82
PGSC0003DMT400042202 Potato cytosol, mitochondrion, peroxisome, plastid 14.97 84.71
Solyc01g007940.2.1 Tomato cytosol 82.95 84.36
GSMUA_Achr8P15810_001 Banana cytosol 83.78 83.78
TraesCS2B01G280600.1 Wheat plastid 82.95 83.3
TraesCS2A01G261600.1 Wheat peroxisome 82.95 83.3
Os07t0108300-01 Rice extracellular, nucleus, plasma membrane 83.78 83.09
KXG34265 Sorghum cytosol 80.25 80.75
Zm00001d007937_P001 Maize mitochondrion 79.63 79.96
HORVU2Hr1G063740.6 Barley peroxisome, vacuole 80.04 79.22
CDY12474 Canola peroxisome, plastid 87.73 78.58
TraesCS2D01G262400.2 Wheat cytosol 77.96 75.15
CDY03822 Canola cytosol 13.72 51.16
CDX83914 Canola mitochondrion 50.31 44.73
CDY26256 Canola mitochondrion 49.9 44.69
CDX96776 Canola mitochondrion 50.31 44.65
CDY48485 Canola plastid 49.69 44.26
CDY21752 Canola mitochondrion 50.1 44.06
CDX81815 Canola mitochondrion 50.1 43.9
CDX68271 Canola mitochondrion 11.64 43.75
CDY50645 Canola cytosol 16.63 37.04
CDX83913 Canola cytosol, nucleus, peroxisome 9.15 34.38
CDX68272 Canola nucleus 6.86 29.73
CDX94359 Canola cytosol 20.17 21.65
CDY71142 Canola cytosol 20.17 21.65
CDX86161 Canola cytosol 5.82 21.21
CDX89355 Canola cytosol 19.75 21.21
CDX92755 Canola cytosol 18.3 21.15
CDY42751 Canola cytosol 19.33 20.62
CDY66472 Canola cytosol 17.26 20.6
CDX75675 Canola cytosol 19.13 20.4
CDY08163 Canola cytosol 19.54 20.0
CDY72652 Canola cytosol 8.32 19.9
CDX69326 Canola cytosol 19.33 19.83
CDY05953 Canola cytosol 19.33 19.79
CDY02111 Canola cytosol 19.33 19.79
CDY23035 Canola cytosol 19.13 19.74
CDX89520 Canola cytosol 19.33 19.62
CDX86796 Canola cytosol 19.75 19.47
CDY65356 Canola cytosol 19.13 19.45
CDY25639 Canola cytosol 19.13 19.41
CDY13251 Canola cytosol 19.75 19.35
CDY69462 Canola cytosol 18.71 19.19
CDY11360 Canola cytosol 18.71 19.03
CDY18674 Canola cytosol 17.26 18.91
CDX81296 Canola cytosol 17.26 18.91
CDX91604 Canola mitochondrion, plastid 19.54 18.8
CDY46931 Canola mitochondrion, plastid 19.54 18.8
CDY15174 Canola cytosol 18.5 17.94
CDX90035 Canola cytosol 16.63 17.9
CDX83146 Canola cytosol 17.26 17.89
CDY34015 Canola cytosol 17.26 17.89
CDY45965 Canola cytosol 19.75 17.5
CDY45474 Canola cytosol 18.71 17.21
CDY43579 Canola cytosol, mitochondrion, plastid 6.24 15.62
Protein Annotations
MapMan:1.3.3.1Gene3D:3.40.640.10Gene3D:3.90.1150.10GO:A0A078JI13UniProt:A0A078JI13InterPro:Aminotransferase_I/II
EnsemblPlants:CDY66294ProteinID:CDY66294ProteinID:CDY66294.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170EnsemblPlantsGene:GSBRNA2T00053330001InterPro:IPR015421
InterPro:IPR015422PFAM:PF00155PANTHER:PTHR11751PANTHER:PTHR11751:SF373InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI0004EE0A3D:::
Description
BnaAnng22050DBnaAnng22050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI13]
Coordinates
chrLK035186:+:15371..18274
Molecular Weight (calculated)
53508.6 Da
IEP (calculated)
6.661
GRAVY (calculated)
-0.197
Length
481 amino acids
Sequence
(BLAST)
001: MSLKALDYET LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVALCQAPF LLDNPNVGMI FPADAISRAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCI IRDQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEETDNW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NLREILKFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPLSKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKSGDISYD QFVRESEGIL ESLRRRARIM TDGFNSCKNV VCNFTEGAMY SFPQIKLPPK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMES FKKFNHEFMS QYGDNFGYSR M
Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)
001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M
Arabidopsis Description
GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.